Set of Tools to Data Analysis using Generalized Linear Models

Documentation for package ‘glmtoolbox’ version 0.1.11

Help Pages

-- A --

adjR2	Adjusted R-squared
adjR2.glm	Adjusted R-squared in Generalized Linear Models
adjR2.gnm	Adjusted R-squared in Generalized Nonlinear Models
adjR2.lm	Adjusted R-squared in Normal Linear Models
advertising	Advertising
AGPC	AGPC for Generalized Estimating Equations
amenorrhea	amenorrhea
anova.glmgee	Comparison of nested Generalized Estimating Equations
anova.gnm	Comparison of nested models in Generalized Nonlinear Models.
anova.overglm	Comparison of nested models for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion.
anova.zeroinflation	Comparison of nested models for Regression Models to deal with Zero-Excess in Count Data
anova2	Comparison of nested Generalized Linear Models
aucuba	Lesions of Aucuba mosaic virus

-- B --

bestSubset	Best Subset Selection
bladder	Bladder cancer in mice
BoxTidwell	Box-Tidwell transformations
BoxTidwell.glm	Box-Tidwell transformations in Generalized Linear Models
BoxTidwell.lm	Box-Tidwell transformations in Normal Linear Models
brains	Mammal brain and body weights

-- C --

calls	Calls to a technical support help line
cellular	Agents to stimulate cellular differentiation
cholecystectomy	Shoulder Pain after Laparoscopic Cholecystectomy
CIC	Correlation Information Criterion for Generalized Estimating Equations
confint.gnm	Confidence Intervals for Generalized Nonlinear Models
confint2	Confidence Intervals for Generalized Linear Models
cooks.distance.glmgee	Cook's Distance for Generalized Estimating Equations
cooks.distance.gnm	Cook's Distance for Generalized Nonlinear Models
cooks.distance.overglm	Cook's Distance for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion
cooks.distance.zeroinflation	Cook's Distance for Regression Models to deal with Zero-Excess in Count Data
Cortisol	Radioimmunological Assay of Cortisol
coupons	Discount coupons

-- D --

depression	Treatment for severe postnatal depression
dfbeta.glmgee	Dfbeta for Generalized Estimating Equations
dfbeta.gnm	Dfbeta statistic for Generalized Nonlinear Models
dfbeta.overglm	Dfbeta statistic for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion.
dfbeta.zeroinflation	Dfbeta statistic for Regression Models to deal with Zero-Excess in Count Data
dilution	Dilution Assay
Drosophila	Developmental rate of Drosophila melanogaster

-- E --

envelope	Normal QQ-plot with simulated envelope of model residuals
envelope.glm	Normal QQ-plot with simulated envelope of residuals in Generalized Linear Models
envelope.gnm	Normal QQ-plot with simulated envelope of residuals in Generalized Nonlinear Models
envelope.lm	Normal QQ-plot with simulated envelope of residuals for normal linear models
envelope.overglm	Normal QQ-plot with Simulated Envelope of Residuals for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion
envelope.zeroinflation	Normal QQ-plot with Simulated Envelope of Residuals for Regression Models to deal with Zero-Excess in Count Data
estequa	Function to extract estimating equations
estequa.glm	Estimating Equations in Generalized Linear Models
estequa.glmgee	Estimating Equations in Generalized Estimating Equations
estequa.overglm	Estimating Equations for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion.
estequa.zeroinflation	Estimating Equations in Regression Models to deal with Zero-Excess in Count Data

-- F --

fabric	Fabric faults
FisherScoring	Fisher Scoring algorithm in Generalized Linear Models

-- G --

GHYC	Gosho-Hamada-Yoshimura's Criterion for Generalized Estimating Equations
glmgee	Fit Generalized Estimating Equations
gnm	Generalized Nonlinear Models.
gnmgee	Fit Nonlinear Generalized Estimating Equations
Grass	The effects of fertilizers on coastal Bermuda grass
GUIDE	Guidelines for Urinary Incontinence Discussion and Evaluation
gvif	Generalized Variance Inflation Factor
gvif.glm	Generalized Variance Inflation Factor
gvif.lm	Generalized Variance Inflation Factor
gvif.overglm	Generalized Variance Inflation Factor for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion

-- H --

The Hosmer-Lemeshow Goodness-of-Fit Test

-- L --

ldh	ldh
leverage	Leverage
leverage.glmgee	Leverage for Generalized Estimating Equations
liver	Liver cancer in mice
localInfluence	Local Influence
localInfluence.glm	Local Influence for Generalized Linear Models
localInfluence.glmgee	Local Influence for Generalized Estimating Equations
localInfluence.gnm	Local Influence for Generalized Nonlinear Models
localInfluence.overglm	Local Influence for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion

-- M --

mammary	Ability of retinyl acetate to prevent mammary cancer in rats
Melanopus	Assay of an Insecticide with a Synergist

-- O --

Oranges	Oranges
orobanche	Germination of Orobanche Seeds
ossification	Teratogenic effects of phenytoin and trichloropropene oxide
overglm	Alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion.

-- P --

PAC	Pardo-Alonso's Criterion for Generalized Estimating Equations
pipeline	Alaska pipeline
predict.glmgee	Predictions for Generalized Estimating Equations

-- Q --

QIC	QIC for Generalized Estimating Equations

-- R --

rabbits	Age and Eye Lens Weight of Rabbits in Australia
races	Hill races in Scotland
residuals.glmgee	Residuals for Generalized Estimating Equations
residuals.gnm	Residuals for Generalized Nonlinear Models
residuals.overglm	Residuals for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion.
residuals.zeroinflation	Residuals in Regression Models to deal with Zero-Excess in Count Data
residuals2	Residuals for Linear and Generalized Linear Models
richness	Species richness
rinse	Dental Clinical Trial
RJC	Rotnitzky–Jewell's Criterion for Generalized Estimating Equations
ROCc	The Receiver Operating Characteristic (ROC) Curve

-- S --

Seizures	Seizures
SGPC	SGPC for Generalized Estimating Equations
shelflife	Shelf life of a photographic developer
skincancer	Skin cancer in women
spruces	Effect of ozone-enriched atmosphere on growth of sitka spruces
Steel	Hardened Steel
stepCriterion	Variable selection in regression models from a chosen criterion
stepCriterion.glm	Variable Selection in Generalized Linear Models
stepCriterion.glmgee	Variable selection in Generalized Estimating Equations
stepCriterion.lm	Variable Selection in Normal Linear Models
stepCriterion.overglm	Variable selection for alternatives to the Poisson and Binomial Regression Models under the presence of Overdispersion
swimmers	Self diagnozed ear infections in swimmers

-- T --

Roots Produced by the Columnar Apple Cultivar Trajan.

-- U --

uti	Urinary Tract Infections in HIV-infected Men

-- V --

vcov.glmgee	Estimate of the variance-covariance matrix in GEEs
vdtest	Test for Varying Dispersion Parameter
vdtest.glm	Test for Varying Dispersion Parameter in Generalized Linear Models
vdtest.gnm	Test for Varying Dispersion Parameter in Generalized Nonlinear Models
vdtest.lm	Test for Varying Dispersion Parameter in Normal Linear Models

-- W --

Fit Weighted Generalized Estimating Equations

-- Z --

zero.excess	Test for zero-excess in Count Regression Models
zeroalt	Zero-Altered Regression Models to deal with Zero-Excess in Count Data
zeroinf	Zero-Inflated Regression Models to deal with Zero-Excess in Count Data