Sequence Error Filter for Formalin-Fixed and Paraffin-Embedded Samples

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Documentation for package ‘MicroSEC’ version 2.1.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

exampleBam	An example BAM file.
exampleMutation	An example mutation file.
fun_analysis	Analyzing function.
fun_hairpin_check	Hairpin-structure sequence check function
fun_homology	Homology check function.
fun_load_bam	BAM file loader
fun_load_chr_no	Chromosome number loading function.
fun_load_genome	Genome loading function.
fun_load_mutation	Mutation data file loader
fun_read_check	Read check function.
fun_repeat_check	Repeat check function.
fun_save	Save function.
fun_setting	Mutated position search function.
fun_summary	Summarizing function.
fun_zero	Divide function without 0/0 errors
homology_searched	An example sequence information file.
msec_analyzed	An example mutation file.
msec_homology_searched	An example mutation file.
msec_read_checked	An example mutation file.
msec_summarized	An example mutation file.
mut_depth_checked	An example sequence information file.