Tools for Prevalence Assessment Studies
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Documentation for package ‘prevalence’ version 0.4.1
Help Pages
| prevalence-package | Tools for prevalence assessment studies |
| as.matrix-method | Methods for Function 'as.matrix' in Package 'prevalence' |
| as.matrix-methods | Methods for Function 'as.matrix' in Package 'prevalence' |
| autocorr.plot-method | Plotting functions from package 'coda' |
| autocorr.plot-methods | Plotting functions from package 'coda' |
| betaExpert | Calculate the parameters of a Beta distribution based on expert information |
| betaPERT | Calculate the parameters of a Beta-PERT distribution |
| convert-methods | Methods for Function 'as.matrix' in Package 'prevalence' |
| define_prior | Definition of 'truePrevMulti' and 'truePrevMulti2' model |
| define_prior2 | Definition of 'truePrevMulti' and 'truePrevMulti2' model |
| define_x | Definition of 'truePrevMulti' and 'truePrevMulti2' model |
| densplot-method | Plotting functions from package 'coda' |
| densplot-methods | Plotting functions from package 'coda' |
| gelman.plot-method | Plotting functions from package 'coda' |
| gelman.plot-methods | Plotting functions from package 'coda' |
| plot-method | Methods for Function 'plot' in Package 'prevalence' |
| plot-methods | Methods for Function 'plot' in Package 'prevalence' |
| plot-methods-coda | Plotting functions from package 'coda' |
| plot.betaExpert | Calculate the parameters of a Beta distribution based on expert information |
| plot.betaPERT | Calculate the parameters of a Beta-PERT distribution |
| prev-class | Class '"prev"' |
| prevalence | Tools for prevalence assessment studies |
| print-method | Methods for Function 'print' in Package 'prevalence' |
| print-methods | Methods for Function 'print' in Package 'prevalence' |
| print.betaExpert | Calculate the parameters of a Beta distribution based on expert information |
| print.betaPERT | Calculate the parameters of a Beta-PERT distribution |
| propCI | Calculate confidence intervals for prevalences and other proportions |
| show-method | Methods for Function 'show' in Package 'prevalence' |
| show-methods | Methods for Function 'show' in Package 'prevalence' |
| summary-method | Methods for Function 'summary' in Package 'prevalence' |
| summary-methods | Methods for Function 'summary' in Package 'prevalence' |
| traceplot-method | Plotting functions from package 'coda' |
| traceplot-methods | Plotting functions from package 'coda' |
| truePrev | Estimate true prevalence from individuals samples |
| truePrevMulti | Estimate true prevalence from individuals samples using multiple tests - conditional probability scheme |
| truePrevMulti2 | Estimate true prevalence from individuals samples using multiple tests - covariance scheme |
| truePrevPools | Estimate true prevalence from pooled samples |