plot-methods-coda {prevalence}

Plotting functions from package coda

Description

Different plotting functions from package coda have been made available as method to class prev

Usage

## S4 method for signature 'prev'
densplot(x, exclude_fixed = TRUE, ...)

## S4 method for signature 'prev'
traceplot(x, exclude_fixed = TRUE, ...)

## S4 method for signature 'prev'
autocorr.plot(x, exclude_fixed = TRUE, chain = 1, ...)

Arguments

x

An object of class prev

exclude_fixed

Should fixed parameters be excluded from plotting? defaults to TRUE

chain

Which chain to plot in autocorr.plot; defaults to 1

...

Other arguments to pass to the specific plot function.

Methods

signature(x = "prev")

Show density, trace, Brooks-Gelman-Rubin and autocorrelation plots.

See Also

prev-class
plot-methods
densplot, traceplot, gelman.plot, autocorr.plot