allChrSizeSample |
Chr. basic data Monocen. |
allMarksSample |
Mark Positional data - monocentrics |
armRatioCI |
FUNCTIONS armRatioCI and swapChrRegionDfSizeAndMarks. |
asymmetry |
FUNCTIONS asymmetry and asymmetryA2. |
asymmetryA2 |
FUNCTIONS asymmetry and asymmetryA2. |
bigdfChrSizeHolo |
Chr. basic data Holo. |
bigdfMarkPosHolo |
Mark Positional data - Holocen. |
bigdfMarkPosHolo2 |
Mark Positional data - Holocen. |
bigdfOfChrSize |
Chr. basic data Monocen. |
bigdfOfChrSize3Mb |
Chr. basic data Holo. |
bigdfOfMarks |
Mark Positional data - monocentrics |
bigdfOfMarks3Mb |
Mark Positional data - Holocen. |
chrbasicdataHolo |
Chr. basic data Holo. |
chrbasicdatamono |
Chr. basic data Monocen. |
citrusMarkPos |
FUNCTIONS: citrusSize, citrusMarkPos, markOverCMA |
citrusSize |
FUNCTIONS: citrusSize, citrusMarkPos, markOverCMA |
dfAlloParentMarks |
Mark Positional data - monocentrics |
dfAlloParentMarksHolo |
Mark Positional data - Holocen. |
dfChrSizeHolo |
Chr. basic data Holo. |
dfMarkColor |
Mark characteristics |
dfMarkColor5S25S |
Mark characteristics |
dfMarkColorIn |
Mark characteristics |
dfMarkPosHolo |
Mark Positional data - Holocen. |
dfMarkStyle |
Mark characteristics |
dfOfChrSize |
Chr. basic data Monocen. |
dfOfMarks |
Mark Positional data - monocentrics |
dfOfMarks2 |
Mark Positional data - monocentrics |
fillMarkInfo |
FUNCTION posCalc and fillMarkInfo |
fillMarkInfo2 |
FUNCTION posCalc and fillMarkInfo |
genBankReadIF |
FUNCTION genBankReadIF |
humChr |
Chr. basic data Monocen. |
humMarkColor |
Mark characteristics |
humMarkPos |
Mark Positional data - monocentrics |
make.uniqueIF |
FUNCTION make.uniqueIF |
makedfMarkColorMycolors |
FUNCTION to make a data.frame of Marks' characterisitcs |
mapGGChr |
FUNCTIONS mapGGChr and mapGGChrMark (for ggplot) |
mapGGChrMark |
FUNCTIONS mapGGChr and mapGGChrMark (for ggplot) |
markdataholo |
Mark Positional data - Holocen. |
markOverCMA |
FUNCTIONS: citrusSize, citrusMarkPos, markOverCMA |
markposDFs |
Mark Positional data - monocentrics |
mydfMaColor |
Mark characteristics |
namesToColumns |
FUNCTION that modifies marks' names into columns |
parentalAndHybChrSize |
Chr. basic data Monocen. |
parentalAndHybHoloChrSize |
Chr. basic data Holo. |
perMark |
FUNCTION perMark |
plotIdiograms |
Plot idiograms of karyotypes/genomes with and without centromere |
posCalc |
FUNCTION posCalc and fillMarkInfo |
robert |
FUNCTION to produce a Robertsonian translocation |
runBoard |
FUNCTION runBoard |
swapChrRegionDfSizeAndMarks |
FUNCTIONS armRatioCI and swapChrRegionDfSizeAndMarks. |
traspadf |
Chr. basic data Monocen. |
traspaMarks |
Mark Positional data - monocentrics |