genBankReadIF {idiogramFISH}

FUNCTION genBankReadIF

Description

genBankReadIF: creates a list of data.frames from a genbank format file or a rentrez object

Requires tidyr

Usage

genBankReadIF(filename.gb, forbiddenFields = "translation")

Arguments

filename.gb

name of file to read, downloaded from genBank, or, object from rentrez::entrez_fetch( db="nuccore", id="theID", rettype="gbwithparts", retmode = "text" )

forbiddenFields

names of field of feature (CDS, gene) to ignore, separated by |. Defaults to "translation"

Value

list