bind_rows_0 |
Bind rows of multiple data frames with zero fill |
blrm_exnex |
Bayesian Logistic Regression Model for N-compounds with EXNEX |
blrm_formula_linear |
Build a BLRM formula with linear interaction term in logit-space |
blrm_formula_saturating |
Build a BLRM formula with saturating interaction term in logit-space |
blrm_trial |
Dose-Escalation Trials guided by Bayesian Logistic Regression Model |
codata_combo2 |
Dataset: historical and concurrent data on a two-way combination |
critical_quantile |
Critical quantile |
critical_quantile.blrmfit |
Critical quantile |
critical_quantile.blrm_trial |
Critical quantile |
diagnostic-quantities |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
dose_info_combo2 |
Dataset: trial dose information for a dual-agent combination study |
drug_info_combo2 |
Dataset: drug information for a dual-agent combination study |
example-combo2 |
Two-drug combination example |
example-combo2_trial |
Two-drug combination example using BLRM Trial |
example-combo3 |
Three-drug combination example |
example-single-agent |
Single Agent Example |
example_model |
Runs example models |
hist_combo2 |
Dataset: historical data on two single-agents to inform a combination study |
hist_combo3 |
Dataset: historical and concurrent data on a three-way combination |
hist_SA |
Single-agent example |
inv_logit |
Logit (log-odds) and inverse-logit function. |
lodds |
Logit (log-odds) and inverse-logit function. |
logit |
Logit (log-odds) and inverse-logit function. |
log_posterior |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
log_posterior.blrmfit |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
neff_ratio |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
neff_ratio.blrmfit |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
nsamples |
Return the number of posterior samples |
nsamples.blrmfit |
Return the number of posterior samples |
nuts_params |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
nuts_params.blrmfit |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
OncoBayes2 |
OncoBayes2 |
plot_blrm |
Plot a fitted model |
plot_toxicity_curve |
Plot a fitted model |
plot_toxicity_curve.blrmfit |
Plot a fitted model |
plot_toxicity_curve.blrm_trial |
Plot a fitted model |
plot_toxicity_intervals |
Plot a fitted model |
plot_toxicity_intervals.blrmfit |
Plot a fitted model |
plot_toxicity_intervals.blrm_trial |
Plot a fitted model |
plot_toxicity_intervals_stacked |
Plot a fitted model |
plot_toxicity_intervals_stacked.blrmfit |
Plot a fitted model |
plot_toxicity_intervals_stacked.blrm_trial |
Plot a fitted model |
posterior_interval |
Posterior intervals |
posterior_interval.blrmfit |
Posterior intervals |
posterior_linpred |
Posterior of linear predictor |
posterior_linpred.blrmfit |
Posterior of linear predictor |
posterior_predict |
Posterior of predictive |
posterior_predict.blrmfit |
Posterior of predictive |
predictive_interval |
Posterior predictive intervals |
predictive_interval.blrmfit |
Posterior predictive intervals |
print.blrmfit |
Bayesian Logistic Regression Model for N-compounds with EXNEX |
print.blrm_trial |
Dose-Escalation Trials guided by Bayesian Logistic Regression Model |
prior_summary |
Summarise model prior |
prior_summary.blrmfit |
Summarise model prior |
rhat |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
rhat.blrmfit |
Extract Diagnostic Quantities of 'OncoBayes2' Models |
summary.blrmfit |
Summarise model results |
summary.blrm_trial |
Summarise trial |
update.blrmfit |
Update data of a BLRM analysis |
update.blrm_trial |
Update data and/or prior of a BLRM trial |