activations |
Activations of (s)tICA |
dual_reg |
Dual Regression |
EM_FCtemplateICA |
EM Algorithm for FC Template ICA Model |
EM_templateICA |
EM Algorithms for Template ICA Models |
EM_templateICA.independent |
EM Algorithms for Template ICA Models |
EM_templateICA.spatial |
EM Algorithms for Template ICA Models |
estimate_nu_matrix |
Estimate IW dof parameter nu based on method of moments |
estimate_template |
Estimate template |
estimate_template.cifti |
Estimate template |
estimate_template.gifti |
Estimate template |
estimate_template.nifti |
Estimate template |
estimate_template_from_DR |
Estimate template from DR |
export_template |
Export template |
Gibbs_AS_posteriorCPP |
Use a Gibbs sampler for the A and S variables (E-step of the EM) |
groupICA.cifti |
Perform group ICA based on CIFTI data |
IW_var |
Compute theoretical Inverse-Wishart variance of covariance matrix elements |
make_mesh |
Make INLA mesh from '"surf"' object |
make_mesh_2D |
Make 2D INLA mesh |
norm_BOLD |
Normalize BOLD data |
PCA |
PCA |
plot.template.cifti |
Plot template |
plot.template.gifti |
Plot template |
plot.template.matrix |
Plot template |
plot.template.nifti |
Plot template |
plot.tICA.cifti |
Plot template |
plot.tICA.matrix |
Plot template |
plot.tICA.nifti |
Plot template |
plot.tICA_act.cifti |
Plot activations |
print.summary.template.cifti |
Summarize a '"template.cifti"' object |
print.summary.template.gifti |
Summarize a '"template.gifti"' object |
print.summary.template.matrix |
Summarize a '"template.matrix"' object |
print.summary.template.nifti |
Summarize a '"template.nifti"' object |
print.summary.tICA.cifti |
Summarize a '"tICA.cifti"' object |
print.summary.tICA.matrix |
Summarize a '"tICA.matrix"' object |
print.summary.tICA.nifti |
Summarize a '"tICA.nifti"' object |
print.summary.tICA_act.cifti |
Summarize a '"tICA_act.cifti"' object |
print.summary.tICA_act.matrix |
Summarize a '"tICA_act.matrix"' object |
print.template.cifti |
Summarize a '"template.cifti"' object |
print.template.gifti |
Summarize a '"template.gifti"' object |
print.template.matrix |
Summarize a '"template.matrix"' object |
print.template.nifti |
Summarize a '"template.nifti"' object |
print.tICA.cifti |
Summarize a '"tICA.cifti"' object |
print.tICA.matrix |
Summarize a '"tICA.matrix"' object |
print.tICA.nifti |
Summarize a '"tICA.nifti"' object |
print.tICA_act.cifti |
Summarize a '"tICA_act.cifti"' object |
print.tICA_act.matrix |
Summarize a '"tICA_act.matrix"' object |
resample_template |
Resample CIFTI template |
summary.template.cifti |
Summarize a '"template.cifti"' object |
summary.template.gifti |
Summarize a '"template.gifti"' object |
summary.template.matrix |
Summarize a '"template.matrix"' object |
summary.template.nifti |
Summarize a '"template.nifti"' object |
summary.tICA.cifti |
Summarize a '"tICA.cifti"' object |
summary.tICA.matrix |
Summarize a '"tICA.matrix"' object |
summary.tICA.nifti |
Summarize a '"tICA.nifti"' object |
summary.tICA_act.cifti |
Summarize a '"tICA_act.cifti"' object |
summary.tICA_act.matrix |
Summarize a '"tICA_act.matrix"' object |
templateICA |
Template ICA |
UpdateTheta_FCtemplateICA |
Update FC Template ICA parameters (tau_sq, alpha, G) |
UpdateTheta_FCtemplateICAcpp |
Update parameters (M-step of the EM) |
UpdateTheta_templateICA |
Parameter Estimates in EM Algorithm for Template ICA Model |
UpdateTheta_templateICA.independent |
Parameter Estimates in EM Algorithm for Template ICA Model |
UpdateTheta_templateICA.spatial |
Parameter Estimates in EM Algorithm for Template ICA Model |
var_sq_err |
Compute the error between empirical and theoretical variance of covariance matrix elements |