A B C D F G L M N O P Q R S T U
sads-package | Maximum Likelihood Models for Species Abundance Distributions |
AIC | Compute table of information criteria and auxiliary info |
AIC-method | Compute table of information criteria and auxiliary info |
AIC-methods | Compute table of information criteria and auxiliary info |
AICc | Compute table of information criteria and auxiliary info |
AICc-method | Compute table of information criteria and auxiliary info |
AICc-methods | Compute table of information criteria and auxiliary info |
ARN82.eB.apr77 | Biomass of marine animals in colonizing experiments in Baltic Sea |
bci | Tree species abundance in Barro Colorado Island Plot |
birds | Abundances of breeding birds in Quacker Run Valley, NY |
coefficients-method | Standard stats methods |
coverpred | ~~ Methods for Function 'coverpred' in Package 'sads' ~~ |
coverpred-class | Class '"coverpred"' for predicted values for abundance classes |
coverpred-method | ~~ Methods for Function 'coverpred' in Package 'sads' ~~ |
coverpred-methods | ~~ Methods for Function 'coverpred' in Package 'sads' ~~ |
dbs | MacArthur's Broken-stick distribution |
dgs | Geometric series distribution |
distr | Continuous or discrete distributions |
dls | Fisher's Log-series distribution |
dmand | Zipf-Mandelbrodt distribution |
dmzsm | Metacommunity zero-sum multinomial distribution |
dpareto | Pareto distribution |
dpoig | Compound Poisson-gamma distribution |
dpoilog | Poisson-lognormal distribution |
dpoix | Compound Poisson-Exponential distribution |
dpowbend | Puyeo's Power-bend discrete distribution |
dpower | Power discrete distribution |
drbs | MacArthur's Broken-stick distribution |
dtrunc | Left-truncation of density, probability and quantile of distributions |
dvolkov | Neutral Biodiversity Theory distribution by Volkov _et al._ |
dzipf | Zipf distribution |
fitbs | ML fitting of species abundance distributions |
fitexp | ML fitting of species abundance distributions |
fitexpC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitgamma | ML fitting of species abundance distributions |
fitgammaC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitgeom | ML fitting of species abundance distributions |
fitgs | ML fitting of species rank-abundance distributions |
fitlnorm | ML fitting of species abundance distributions |
fitlnormC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitls | ML fitting of species abundance distributions |
fitmand | ML fitting of species rank-abundance distributions |
fitmzsm | ML fitting of species abundance distributions |
fitnbinom | ML fitting of species abundance distributions |
fitpareto | ML fitting of species abundance distributions |
fitparetoC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitpoilog | ML fitting of species abundance distributions |
fitpowbend | ML fitting of species abundance distributions |
fitpower | ML fitting of species abundance distributions |
fitrad | ML fitting of species rank-abundance distributions |
fitrad-class | Class '"fitrad"' for maximum likelihood fitting of species rank-abundance distributions |
fitrbs | ML fitting of species rank-abundance distributions |
fitsad | ML fitting of species abundance distributions |
fitsad-class | Class '"fitsad"' for maximum likelihood fitting of species abundance distributions |
fitsadC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitsadC-class | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
fitted-method | Standard stats methods |
fitted.values-method | Standard stats methods |
fitvolkov | ML fitting of species abundance distributions |
fitweibull | ML fitting of species abundance distributions |
fitweibullC | ML fitting of species abundance distributions to data pooled in abundance classes |
fitzipf | ML fitting of species rank-abundance distributions |
grasslands | Coverages of plants species in a plot in Southern Brazilian Grasslands |
likelregions | Log-likelihood profiles at original scale |
likelregions-class | Class '"likelregions"' for likelihood profiles of maximum likelihood fits |
likelregions-method | Log-likelihood profiles at original scale |
lines-method | Class '"octav"' for frequencies in abundance octaves |
lines-method | Class '"rad"' for rank-abundance data |
moths | Moths caught with light traps at Rothamsted 1933-1936 |
nobs | Compute table of information criteria and auxiliary info |
nobs-method | Compute table of information criteria and auxiliary info |
nobs-method | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
nobs-methods | Compute table of information criteria and auxiliary info |
octav | Frequencies of species in octaves |
octav-class | Class '"octav"' for frequencies in abundance octaves |
octav-method | Frequencies of species in octaves |
octavpred | Predicted frequencies of species in octaves |
octavpred-method | Predicted frequencies of species in octaves |
okland | Abundances of land snail species in Norway |
pbs | MacArthur's Broken-stick distribution |
pgs | Geometric series distribution |
plot-method | Class '"fitrad"' for maximum likelihood fitting of species rank-abundance distributions |
plot-method | Class '"fitsad"' for maximum likelihood fitting of species abundance distributions |
plot-method | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
plot-method | Class '"octav"' for frequencies in abundance octaves |
plot-method | Class '"rad"' for rank-abundance data |
plotprofmle | Log-likelihood profiles at original scale |
plotprofmle-method | Log-likelihood profiles at original scale |
pls | Fisher's Log-series distribution |
pmand | Zipf-Mandelbrodt distribution |
pmzsm | Metacommunity zero-sum multinomial distribution |
points-method | Class '"coverpred"' for predicted values for abundance classes |
points-method | Class '"octav"' for frequencies in abundance octaves |
points-method | Class '"rad"' for rank-abundance data |
ppareto | Pareto distribution |
ppoig | Compound Poisson-gamma distribution |
ppoilog | Poisson-lognormal distribution |
ppoix | Compound Poisson-Exponential distribution |
ppowbend | Puyeo's Power-bend discrete distribution |
ppower | Power discrete distribution |
pprad | Percentile-percentile plots for species-abundance and rank-abundance models |
pprad-method | Class '"fitrad"' for maximum likelihood fitting of species rank-abundance distributions |
pprad-method | Percentile-percentile plots for species-abundance and rank-abundance models |
ppsad | Percentile-percentile plots for species-abundance and rank-abundance models |
ppsad-method | Class '"fitsad"' for maximum likelihood fitting of species abundance distributions |
ppsad-method | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
ppsad-method | Percentile-percentile plots for species-abundance and rank-abundance models |
prbs | MacArthur's Broken-stick distribution |
pred.logser | Predicted number of species by Fisher's Logseries |
ptrunc | Left-truncation of density, probability and quantile of distributions |
pvolkov | Neutral Biodiversity Theory distribution by Volkov _et al._ |
pzipf | Zipf distribution |
qbs | MacArthur's Broken-stick distribution |
qgs | Geometric series distribution |
qls | Fisher's Log-series distribution |
qmand | Zipf-Mandelbrodt distribution |
qmzsm | Metacommunity zero-sum multinomial distribution |
qpareto | Pareto distribution |
qpoig | Compound Poisson-gamma distribution |
qpoilog | Poisson-lognormal distribution |
qpoix | Compound Poisson-Exponential distribution |
qpowbend | Puyeo's Power-bend discrete distribution |
qpower | Power discrete distribution |
qqrad | Quantile-quantile plots for species-abundance and rank-abundance models |
qqrad-method | Class '"fitrad"' for maximum likelihood fitting of species rank-abundance distributions |
qqrad-method | Quantile-quantile plots for species-abundance and rank-abundance models |
qqsad | Quantile-quantile plots for species-abundance and rank-abundance models |
qqsad-method | Class '"fitsad"' for maximum likelihood fitting of species abundance distributions |
qqsad-method | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
qqsad-method | Quantile-quantile plots for species-abundance and rank-abundance models |
qrbs | MacArthur's Broken-stick distribution |
qtrunc | Left-truncation of density, probability and quantile of distributions |
qvolkov | Neutral Biodiversity Theory distribution by Volkov _et al._ |
qzipf | Zipf distribution |
rad | Rank-abundance data frame |
rad-class | Class '"rad"' for rank-abundance data |
radpred | Predicted ranked abundance of species |
radpred-method | Predicted ranked abundance of species |
rbs | MacArthur's Broken-stick distribution |
residuals-method | Standard stats methods |
rgs | Geometric series distribution |
rls | Fisher's Log-series distribution |
rmand | Zipf-Mandelbrodt distribution |
rmzsm | Metacommunity zero-sum multinomial distribution |
rpareto | Pareto distribution |
rpoig | Compound Poisson-gamma distribution |
rpoilog | Poisson-lognormal distribution |
rpoix | Compound Poisson-Exponential distribution |
rpowbend | Puyeo's Power-bend discrete distribution |
rpower | Power discrete distribution |
rrbs | MacArthur's Broken-stick distribution |
rsad | Sampling from a species abundance distribution |
rtrunc | Left-truncation of density, probability and quantile of distributions |
rvolkov | Neutral Biodiversity Theory distribution by Volkov _et al._ |
rzipf | Zipf distribution |
sads | Maximum Likelihood Models for Species Abundance Distributions |
show-method | Class '"fitrad"' for maximum likelihood fitting of species rank-abundance distributions |
show-method | Class '"fitsad"' for maximum likelihood fitting of species abundance distributions |
show-method | Class '"fitsadC"' for maximum likelihood fitting of species abundance distributions from data in abundance classes |
show-method | Class '"likelregions"' for likelihood profiles of maximum likelihood fits |
show-method | Summary for fitsad/fitrad calls |
summary-method | Summary for fitsad/fitrad calls |
summary.sads-class | Summary for fitsad/fitrad calls |
Svolkov | Neutral Biodiversity Theory distribution by Volkov _et al._ |
trueLL | True likelihood for continuous variables |
trueLL-method | True likelihood for continuous variables |
trueLL-methods | True likelihood for continuous variables |
updaterad | Updating of MLE fits by profiling |
updatesad | Updating of MLE fits by profiling |