rSPDE-package |
Rational approximations of fractional SPDEs. |
augment |
Augment data with information from a 'rspde_lme' object |
augment.rspde_lme |
Augment data with information from a 'rspde_lme' object |
bru_get_mapper.inla_rspde |
rSPDE inlabru mapper |
construct.spde.matern.loglike |
Constructor of Matern loglikelihood functions for non-stationary models. |
cross_validation |
Perform cross-validation on a list of fitted models. |
folded.matern.covariance.1d |
The 1d folded Matern covariance function |
folded.matern.covariance.2d |
The 2d folded Matern covariance function |
fractional.operators |
Rational approximations of fractional operators |
get.initial.values.rSPDE |
Initial values for log-likelihood optimization in rSPDE models with a latent stationary Gaussian Matern model |
gg_df |
Data frame for result objects from R-INLA fitted models to be used in ggplot2 |
gg_df.rspde_result |
Data frame for rspde_result objects to be used in ggplot2 |
glance |
Glance at an 'rspde_lme' object |
glance.rspde_lme |
Glance at an 'rspde_lme' object |
graph_data_rspde |
Data extraction from metric graphs for 'rSPDE' models |
ibm_jacobian.bru_mapper_inla_rspde |
rSPDE inlabru mapper |
ibm_n.bru_mapper_inla_rspde |
rSPDE inlabru mapper |
ibm_values.bru_mapper_inla_rspde |
rSPDE inlabru mapper |
intrinsic.matern.operators |
Covariance-based approximations of intrinsic fields |
matern.covariance |
The Matern covariance function |
matern.operators |
Rational approximations of stationary Gaussian Matern random fields |
operator.operations |
Operations with the Pr and Pl operators |
Pl.mult |
Operations with the Pr and Pl operators |
Pl.solve |
Operations with the Pr and Pl operators |
Pr.mult |
Operations with the Pr and Pl operators |
Pr.solve |
Operations with the Pr and Pl operators |
precision |
Get the precision matrix of CBrSPDEobj objects |
precision.CBrSPDEobj |
Get the precision matrix of CBrSPDEobj objects |
precision.inla_rspde |
Get the precision matrix of 'inla_rspde' objects |
predict.CBrSPDEobj |
Prediction of a fractional SPDE using the covariance-based rational SPDE approximation |
predict.rSPDEobj |
Prediction of a fractional SPDE using a rational SPDE approximation |
predict.rspde_lme |
Prediction of a mixed effects regression model on a metric graph. |
print.CBrSPDEobj |
Summarise CBrSPDE objects |
print.rSPDEobj |
Summarise rSPDE objects |
print.summary.CBrSPDEobj |
Summarise CBrSPDE objects |
print.summary.rSPDEobj |
Summarise rSPDE objects |
Q.mult |
Operations with the Pr and Pl operators |
Q.solve |
Operations with the Pr and Pl operators |
Qsqrt.mult |
Operations with the Pr and Pl operators |
Qsqrt.solve |
Operations with the Pr and Pl operators |
rational.order |
Get the order of rational approximation. |
rational.order<- |
Changing the order of the rational approximation |
rational.type |
Get type of rational approximation. |
rational.type<- |
Changing the type of the rational approximation |
require.nowarnings |
Warnings free loading of add-on packages |
rSPDE |
Rational approximations of fractional SPDEs. |
rSPDE.A1d |
Observation matrix for finite element discretization on R |
rSPDE.construct.matern.loglike |
Constructor of Matern loglikelihood functions. |
rSPDE.fem1d |
Finite element calculations for problems on R |
rSPDE.fem2d |
Finite element calculations for problems in 2D |
rSPDE.loglike |
Object-based log-likelihood function for latent Gaussian fractional SPDE model |
rspde.make.A |
Observation/prediction matrices for rSPDE models. |
rspde.make.index |
rSPDE model index vector generation |
rspde.matern |
Matern rSPDE model object for INLA |
rSPDE.matern.loglike |
Object-based log-likelihood function for latent Gaussian fractional SPDE model using the rational approximations |
rspde.matern.precision |
Precision matrix of the covariance-based rational approximation of stationary Gaussian Matern random fields |
rspde.matern.precision.integer |
Precision matrix of stationary Gaussian Matern random fields with integer covariance exponent |
rspde.matern.precision.integer.opt |
Optimized precision matrix of stationary Gaussian Matern random fields with integer covariance exponent |
rspde.matern.precision.opt |
Optimized precision matrix of the covariance-based rational approximation |
rspde.mesh.project |
Calculate a lattice projection to/from an 'inla.mesh' for rSPDE objects |
rspde.mesh.project.inla.mesh |
Calculate a lattice projection to/from an 'inla.mesh' for rSPDE objects |
rspde.mesh.project.inla.mesh.1d |
Calculate a lattice projection to/from an 'inla.mesh' for rSPDE objects |
rspde.mesh.project.rspde.mesh.projector |
Calculate a lattice projection to/from an 'inla.mesh' for rSPDE objects |
rspde.mesh.projector |
Calculate a lattice projection to/from an 'inla.mesh' for rSPDE objects |
rspde.metric_graph |
Matern rSPDE model object for metric graphs in INLA |
rspde.result |
rSPDE result extraction from INLA estimation results |
rspde_lme |
rSPDE linear mixed effects models |
Sigma.mult |
Operations with the Pr and Pl operators |
Sigma.solve |
Operations with the Pr and Pl operators |
simulate.CBrSPDEobj |
Simulation of a fractional SPDE using the covariance-based rational SPDE approximation |
simulate.rSPDEobj |
Simulation of a fractional SPDE using a rational SPDE approximation |
spde.make.A |
Observation/prediction matrices for rSPDE models with integer smoothness. |
spde.matern.loglike |
Parameter-based log-likelihood for a latent Gaussian Matern SPDE model using a rational SPDE approximation |
spde.matern.operators |
Rational approximations of non-stationary Gaussian SPDE Matern random fields |
summary.CBrSPDEobj |
Summarise CBrSPDE objects |
summary.rSPDEobj |
Summarise rSPDE objects |
summary.rspde_lme |
Summary Method for 'rspde_lme' Objects. |
summary.rspde_result |
Summary for posteriors of field parameters for an 'inla_rspde' model from a 'rspde_result' object |
update.CBrSPDEobj |
Update parameters of CBrSPDEobj objects |
update.rSPDEobj |
Update parameters of rSPDEobj objects |
variogram.intrinsic.spde |
Variogram of intrinsic SPDE model |