rspde.make.A {rSPDE}

Observation/prediction matrices for rSPDE models.

Description

Constructs observation/prediction weight matrices for rSPDE models based on inla.mesh or inla.mesh.1d objects.

Usage

rspde.make.A(
  mesh = NULL,
  loc = NULL,
  A = NULL,
  dim = NULL,
  rspde.order = 2,
  nu = NULL,
  index = NULL,
  group = NULL,
  repl = 1L,
  n.group = NULL,
  n.repl = NULL
)

Arguments

mesh

An inla.mesh, an inla.mesh.1d object or a metric_graph object.

loc

Locations, needed if an INLA mesh is provided

A

The A matrix from the standard SPDE approach, such as the matrix returned by inla.spde.make.A. Should only be provided if mesh is not provided.

dim

the dimension. Should only be provided if an mesh is not provided.

rspde.order

The order of the covariance-based rational SPDE approach.

nu

If NULL, then the model will assume that nu will be estimated. If nu is fixed, you should provide the value of nu.

index

For each observation/prediction value, an index into loc. Default is seq_len(nrow(A.loc)).

group

For each observation/prediction value, an index into the group model.

repl

For each observation/prediction value, the replicate index.

n.group

The size of the group model.

n.repl

The total number of replicates.

Value

The A matrix for rSPDE models.

Examples

 #tryCatch version
tryCatch({
if (requireNamespace("INLA", quietly = TRUE)){
library(INLA)

set.seed(123)
loc <- matrix(runif(100 * 2) * 100, 100, 2)
mesh <- inla.mesh.2d(
  loc = loc,
  cutoff = 50,
  max.edge = c(50, 500)
)
A <- rspde.make.A(mesh, loc = loc, rspde.order = 3)
}
#stable.tryCatch
}, error = function(e){print("Could not run the example")})