Cleans and Normalizes FLUOstar DBF and DAT Files

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Documentation for package ‘normfluodbf’ version 1.5.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

actual_cols_used	Title: A function to get the actual columns used in the assay.
check_dat	Title: A function to check for DATs in a directory.
check_dbf	Title: A function to check for DBFs in a directory.
clean_odddat_optimus	Title: DAT file data frame cleaner.
clean_odd_cc	Title: DAT file data frame cleaner.
comma_cleaner	Title: Comma Cleaner function.
dat_1	dat_1.
dat_2	dat_2.
dat_3	dat_3.
dat_4	dat_4.
dat_5	dat_5.
dat_6	dat_6.
dat_7	dat_7.
dat_col_names_horizontal	Title: Attribute(s) naming function.
dat_col_names_optimus	Title: Attribute(s) naming function.
dat_col_names_prime	Title: Attribute(s) naming function.
dat_col_names_rigid	Title: Attribute(s) naming function.
decimal_scaling	Title: A decimal scaling function (a machine learning tool).
fluor_threshold_check	Title: A fluorescence quantification Quality Control (QC) function.
fluor_threshold_check_na	Title: A missing value (NA) Quality Control (QC) function.
fluor_threshold_check_raw	Title: A fluorescence quantification Quality Control (QC) function.
generic_identifier	Title: A function to append a generic identifier attribute to any data frame, but users supply a name for said attribute.
ggplot_tnp	Title: A Visualization function.
liposomes_214	liposomes_214.
liposomes_215	liposomes_215.
liposomes_216	liposomes_216.
liposomes_218	liposomes_218.
liposomes_221	liposomes_221.
liposomes_227	liposomes_227.
log_transformation	Title: A log transformation function.
min_max_norm	Title: Min-Max normalization on a 0-1 scale.
min_max_norm_percent	Title: Min-Max normalization on a 0-100 scale.
normfluodat	Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
normfluodatfull	Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
normfluodatlite	Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
normfluordat	Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
normfluordbf	Title: Cleans and Normalizes DBF files obtained from experiments using the FLUOstar microplate reader.
norm_applier	Title: A normalization applier built on lapply.
norm_tidy_dbf	Title: Cleans and Normalizes DBF files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
norm_z	Title: Z-score standardization or normalization function.
resample_dat	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_alt	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt_bfv	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt_bf_na	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt_na	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_naretainer	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_optimus	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_optimus_backend	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_optimus_na	Title: A function to create an attribute or column for each sample loaded into the microplate wells.
roundfluor	Title: A value rounding function.
time_attribute	Title: A time attribute generating function
unique_identifier	Title: A function to append a unique identifier attribute to any data frame within the normfluodbf package.