fluor_threshold_check_raw {normfluodbf} | R Documentation |
Title: A fluorescence quantification Quality Control (QC) function.
Description
A function designed to check that fluorescence values do not exceed the upper limit (2^15 or 32768) OR fall below the lower limit (2^11 or 2048). Fluorescence values that exceed these thresholds are considered noisy and lead to incorrect interpretation of analysis results.
Usage
fluor_threshold_check_raw(clean_df, fun = NA)
Arguments
clean_df |
A cleaned data frame. |
fun |
A parameter used for Boolean expressions. |
Value
A polite warning message to the data analyst or researcher.
Note
This function works on a different type of data frame but in a similar manner to @seealso fluor_threshold_check()
.
Author(s)
Tingwei Adeck
See Also
fluor_threshold_check()
, fluor_threshold_check_na()
Examples
fpath <- system.file("extdata", "dat_1.dat", package = "normfluodbf", mustWork = TRUE)
dat_df <- read.table(file=fpath)
nocomma_dat <- clean_odddat_optimus(dat_df)
fluor_threshold_check_raw(nocomma_dat)
[Package normfluodbf version 1.5.2 Index]