Visually Exploring Random Forests

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Documentation for package ‘ggRandomForests’ version 2.2.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ggRandomForests-package	ggRandomForests: Visually Exploring Random Forests
calc_auc	Area Under the ROC Curve calculator
calc_auc.gg_roc	Area Under the ROC Curve calculator
calc_roc	Receiver Operator Characteristic calculator
calc_roc.randomForest	Receiver Operator Characteristic calculator
calc_roc.rfsrc	Receiver Operator Characteristic calculator
combine.gg_partial	combine two gg_partial objects
combine.gg_partial_list	combine two gg_partial objects
gg_error	randomForest error rate data object
gg_error.randomForest	randomForest error rate data object
gg_error.randomForest.formula	randomForest error rate data object
gg_error.rfsrc	randomForest error rate data object
gg_interaction	Minimal Depth Variable Interaction data object ('find.interaction').
gg_interaction.randomForest	Minimal Depth Variable Interaction data object ('find.interaction').
gg_interaction.rfsrc	Minimal Depth Variable Interaction data object ('find.interaction').
gg_minimal_depth	Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_depth.randomForest	Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_depth.rfsrc	Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_vimp	Minimal depth vs VIMP comparison by variable rankings.
gg_minimal_vimp.randomForest	Minimal depth vs VIMP comparison by variable rankings.
gg_minimal_vimp.rfsrc	Minimal depth vs VIMP comparison by variable rankings.
gg_partial	Partial variable dependence object
gg_partial.randomForest	Partial variable dependence object
gg_partial.rfsrc	Partial variable dependence object
gg_partial_coplot	Data structures for stratified partial coplots
gg_partial_coplot.rfsrc	Data structures for stratified partial coplots
gg_partial_list	Partial variable dependence object
gg_rfsrc	Predicted response data object
gg_rfsrc.rfsrc	Predicted response data object
gg_roc	ROC (Receiver operator curve) data from a classification random forest.
gg_roc.randomForest	ROC (Receiver operator curve) data from a classification random forest.
gg_roc.rfsrc	ROC (Receiver operator curve) data from a classification random forest.
gg_survival	Nonparametric survival estimates.
gg_variable	Marginal variable dependence data object.
gg_variable.random	Marginal variable dependence data object.
gg_variable.randomForest	Marginal variable dependence data object.
gg_variable.rfsrc	Marginal variable dependence data object.
gg_vimp	Variable Importance (VIMP) data object
gg_vimp.randomForest	Variable Importance (VIMP) data object
gg_vimp.randomForest.formula	Variable Importance (VIMP) data object
gg_vimp.rfsrc	Variable Importance (VIMP) data object
kaplan	nonparametric Kaplan-Meier estimates
nelson	nonparametric Nelson-Aalen estimates
plot.gg_error	Plot a 'gg_error' object
plot.gg_interaction	plot.gg_interaction Plot a 'gg_interaction' object,
plot.gg_minimal_depth	Plot a 'gg_minimal_depth' object for random forest variable ranking.
plot.gg_minimal_vimp	Plot a 'gg_minimal_vimp' object for comparing the Minimal Depth and VIMP variable rankings.
plot.gg_partial	Partial variable dependence plot, operates on a 'gg_partial' object.
plot.gg_partial_list	Partial variable dependence plot, operates on a 'gg_partial_list' object.
plot.gg_rfsrc	Predicted response plot from a 'gg_rfsrc' object.
plot.gg_roc	ROC plot generic function for a 'gg_roc' object.
plot.gg_survival	Plot a 'gg_survival' object.
plot.gg_variable	Plot a 'gg_variable' object,
plot.gg_vimp	Plot a 'gg_vimp' object, extracted variable importance of a 'rfsrc' object
print.gg_minimal_depth	Print a 'gg_minimal_depth' object.
quantile_pts	Find points evenly distributed along the vectors values.
shift	lead function to shift by one (or more).
surface_matrix	Construct a set of (x, y, z) matrices for surface plotting a 'gg_partial_coplot' object
surface_matrix.gg_partial_coplot	Construct a set of (x, y, z) matrices for surface plotting a 'gg_partial_coplot' object