Estimation of (Local) False Discovery Rates and Higher Criticism


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Documentation for package ‘fdrtool’ version 1.2.16

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censored.fit Fit Null Distribution To Censored Data by Maximum Likelihood
dcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
dhalfnorm The Half-Normal Distribution
fdrtool Estimate (Local) False Discovery Rates For Diverse Test Statistics
fitted.monoreg Monotone Regression: Isotonic Regression and Antitonic Regression
fndr.cutoff Fit Null Distribution To Censored Data by Maximum Likelihood
gcmlcm Greatest Convex Minorant and Least Concave Majorant
grenander Grenander Estimator of a Decreasing or Increasing Density
halfnormal The Half-Normal Distribution
hc.score Compute Empirical Higher Criticism Scores and Corresponding Decision Threshold From p-Values
hc.thresh Compute Empirical Higher Criticism Scores and Corresponding Decision Threshold From p-Values
monoreg Monotone Regression: Isotonic Regression and Antitonic Regression
pcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
phalfnorm The Half-Normal Distribution
plot.grenander Grenander Estimator of a Decreasing or Increasing Density
plot.monoreg Monotone Regression: Isotonic Regression and Antitonic Regression
pval.estimate.eta0 Estimate the Proportion of Null p-Values
pvalues Example p-Values
qcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
qhalfnorm The Half-Normal Distribution
rcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
residuals.monoreg Monotone Regression: Isotonic Regression and Antitonic Regression
rhalfnorm The Half-Normal Distribution
sd2theta The Half-Normal Distribution
theta2sd The Half-Normal Distribution