Quantify the Relationship Between Development Rate and Temperature in Ectotherms


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Documentation for package ‘devRate’ version 0.2.4

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devRate-package devRate: A package to quantify the relationship between development rate and temperature in ectotherms.
analytis_77 Analytis equation of development rate as a function of temperature.
bayoh_03 Bayoh and Lindsay equation of development rate as a function of temperature.
beta_16 Beta2 equation of development rate as a function of temperature.
beta_95 Beta equation of development rate as a function of temperature.
bieri1_83 Bieri equation 1 of development rate as a function of temperature.
briere1_99 Briere et al equation 1 of development rate as a function of temperature.
briere2_99 Briere et al equation 2 of development rate as a function of temperature.
campbell_74 Campbell et al. equation of development rate as a function of temperature.
damos_08 Simplified beta type equation of development rate as a function of temperature.
damos_11 Inverse second-order polynomial equation of development rate as a function of temperature.
davidson_44 Davidson equation of development rate as a function of temperature.
devRate devRate: A package to quantify the relationship between development rate and temperature in ectotherms.
devRateEqList The list of all available equations of development rate as a function of temperature.
devRateEqStartVal Default starting values for each equation listed in the devRateEqList object.
devRateFind Find models for species
devRateIBM Forecast ectotherm phenology as a function of temperature and development rate models
devRateIBMdataBase Forecast ectotherm phenology as a function of temperature and development rate models available in the package database
devRateIBMgen Number of generations
devRateIBMparam Forecast ectotherm phenology as a function of temperature and development rate models using known parameters
devRateIBMPlot Plot phenology table
devRateInfo Display information about an equation
devRateMap Predict development rate from a matrix of temperatures
devRateModel Compute non-linear regression
devRateModelAll Fitting all models listed in devRateEqList to a development rate dataset
devRatePlot Plot the empirical points and the regression
devRatePlotInfo Plot thermal performance curves from the literature
devRatePrint Report model output from the NLS fit
devRateQlBio Biological likelihood of nls fits
devRateQlStat Statistical indices of the nls goodness-of-fit
dRGetMetrics Life traits from Thermal Performance Curve
dRGetMetricsInfo Life traits from the ectotherm database
exTropicalMoth Tropical moth development rate at constant temperatures.
harcourtYee_82 Harcourt and Yee equation of development rate as a function of temperature.
hilbertLogan_83 Holling type III equation of development rate as a function of temperature.
janisch_32 Janisch equation of development rate as a function of temperature (Analytis modification).
kontodimas_04 Kontodimas et al. equation of development rate as a function of temperature.
lactin1_95 Lactin et al. equation 1 of development rate as a function of temperature.
lactin2_95 Lactin et al. equation 2 of development rate as a function of temperature.
lamb_92 Lamb equation of development rate as a function of temperature.
logan10_76 Logan et al. equation 10 of development rate as a function of temperature.
logan6_76 Logan et al. equation 6 of development rate as a function of temperature.
perf2_11 Performance-2 equation of development rate as a function of temperature.
poly2 Second-order polynomial equation of development rate as a function of temperature.
poly4 Fourth-order polynomial equation of development rate as a function of temperature.
ratkowsky_82 Ratkowsky equation of development rate as a function of temperature (Shi modification).
ratkowsky_83 Ratkowsky equation of development rate as a function of temperature (Shi 2016 modification).
regniere_12 Regniere equation of development rate as a function of temperature.
rootsq_82 Root square equation of development rate as a function of temperature.
schoolfieldHigh_81 Schoolfield et al. equation of development rate as a function of temperature for intermediate to high temperatures only.
schoolfieldLow_81 Schoolfield et al. equation of development rate as a function of temperature for intermediate to low temperatures only.
schoolfield_81 Schoolfield et al. equation of development rate as a function of temperature.
sharpeDeMichele_77 Sharpe and DeMichele equation of development rate as a function of temperature.
shi_11 Shi equation of development rate as a function of temperature.
stinner_74 Stinner et al equation of development rate as a function of temperature.
taylor_81 Taylor equation of development rate as a function of temperature.
wagner_88 Hagstrum et Milliken equation of development rate as a function of temperature retrieved from Wagner 1984.
wangengel_98 Wang and Engel equation of development rate as a function of temperature.
wang_82 Wang et al. equation of development rate as a function of temperature.