Cumulative Percent Decay Curve Generator


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Documentation for package ‘cuperdec’ version 1.0.0

Help Pages

adaptive_burnin_filter Calculate adaptive burn-in retain/discard list
calculate_curve Calculate cumulative decay percent curve
cuperdec_database_ex Example isolation source database input for cuperdec
cuperdec_metadata_ex Example metadata file input for cuperdec
cuperdec_taxatable_ex Example taxon table input for cuperdec
hard_burnin_filter Calculate hard burn-in retain/discard list
load_database Load database
load_map Load metadata table
load_taxa_table Load OTU table
plot_cuperdec Plot cumulative percent decay curves
simple_filter Apply simple percentage filter