cuperdec_database_ex {cuperdec}

Example isolation source database input for cuperdec

Description

Example isolation source database used for input to cuperdec based. Species names are from a NCBI Nt database and isolation sources gather from the Human Oral Microbiome database, NCBI GenBank, and manual curation.

Usage

data(cuperdec_database_ex)

Format

An TSV table loaded as a tibble.

Source

doi: 10.5281/zenodo.3740492

Examples

data(cuperdec_database_ex)
load_database(cuperdec_database_ex, target = "oral")