Univariate Feature Selection and Compound Covariate for Predicting Survival


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Documentation for package ‘compound.Cox’ version 3.20

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compound.Cox-package Univariate Feature Selection and Compound Covariate for Predicting Survival
CG.Clayton Copula-graphic estimator under the Clayton copula.
CG.Gumbel Copula-graphic estimator under the Gumbel copula.
cindex.CV Cross-validated c-index for measuring the predictive accuracy of a prognostic index under a copula-based dependent censoring model.
compound.Cox Univariate Feature Selection and Compound Covariate for Predicting Survival
compound.reg Compound shrinkage estimation under the Cox model
dependCox.reg Univariate Cox regression under dependent censoring.
dependCox.reg.CV Cox regression under dependent censoring.
Lung Survival data for patients with non-small-cell lung cancer.
PBC Primary biliary cirrhosis (PBC) of the liver data
uni.score Univariate Cox score test
uni.selection Univariate feature selection based on univariate significance tests
uni.Wald Univariate Cox Wald test
X.pathway Generate a matrix of gene expressions in the presence of gene pathways
X.tag Generate a matrix of gene expressions in the presence of tag genes