Analysis of Multiplex Cytometric Bead Assays
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Documentation for package ‘beadplexr’ version 0.5.0
Help Pages
| approx_adjust | Approximate bandwidth adjustment. |
| as_data_frame_analyte | Cast list of analytes to 'data.frame' |
| bp_clara | Clustering with trimming |
| bp_dbscan | Clustering with trimming |
| bp_density_cut | Clustering with trimming |
| bp_kmeans | Clustering with trimming |
| bp_mclust | Clustering with trimming |
| calculate_concentration | Calculate concentration. |
| calc_analyte_mfi | Calculate the analyte intensity |
| calc_std_conc | Calculate standard concentration |
| cluster_events | Clustering with trimming |
| despeckle | Despeckle parameters |
| dist_chebyshev | Chebyshev distance |
| facs_density1d | Plot FACS data. |
| facs_density2d | Plot FACS data. |
| facs_hexbin | Plot FACS data. |
| facs_plot | Plot FACS data. |
| facs_scatter | Plot FACS data. |
| fit_standard_curve | Fit a standard curve |
| identify_analyte | Identify analyte |
| identify_assay_analyte | Identify multiplex assay analytes |
| identify_cba_analyte | Identify multiplex assay analytes |
| identify_legendplex_analyte | Identify multiplex assay analytes |
| identify_macsplex_analyte | Identify multiplex assay analytes |
| load_panel | Load panel information |
| lplex | LEGENDplex example data |
| plot_concentrations | Plot concentrations |
| plot_estimate | Plot concentrations |
| plot_std_curve | Plot concentrations |
| plot_target_est_conc | Plot concentrations |
| read_fcs | Read a fcs file. |
| simplex | Simulated beadplex data |
| trim_population | Trim cluster. |
| turning_point | Turning points |