simplex {beadplexr} | R Documentation |
Simulated beadplex data
Description
Very simple, simulated multiplex data to demonstrate the clustering functionality of the beadplexr package on CBA and MACSPlex assays.
Usage
data(simplex)
Format
A list with three elements. Each element is a data.frame
of 3000 to 9000 rows. The exact format depends on the assay simulated:
- lplex
-
Simulated LEGENDplex data. A single
data.frame
with the columns:- FSC
The forward scatter parameter
- SSC
The side scatter parameter
- APC
Intensity in the APC channel
- PE
Intensity in the PE channel
- mplex
-
Simulated MACSPlex data. A single
data.frame
with the columns:- FSC
The forward scatter parameter
- SSC
The side scatter parameter
- FITC
Intensity in the FITC channel
- PE
Intensity in the PE channel
- APC
Intensity in the PE channel
- cba
-
Simulated CBA data. A single
data.frame
with the columns:- FSC
The forward scatter parameter
- SSC
The side scatter parameter
- APC
Intensity in the APC channel
- APC-Cy7
Intensity in the APC-Cy7 channel
- PE
Intensity in the PE channel
Source
Artificial