simplex {beadplexr}R Documentation

Simulated beadplex data

Description

Very simple, simulated multiplex data to demonstrate the clustering functionality of the beadplexr package on CBA and MACSPlex assays.

Usage

data(simplex)

Format

A list with three elements. Each element is a data.frame of 3000 to 9000 rows. The exact format depends on the assay simulated:

lplex

Simulated LEGENDplex data. A single data.frame with the columns:

FSC

The forward scatter parameter

SSC

The side scatter parameter

APC

Intensity in the APC channel

PE

Intensity in the PE channel

mplex

Simulated MACSPlex data. A single data.frame with the columns:

FSC

The forward scatter parameter

SSC

The side scatter parameter

FITC

Intensity in the FITC channel

PE

Intensity in the PE channel

APC

Intensity in the PE channel

cba

Simulated CBA data. A single data.frame with the columns:

FSC

The forward scatter parameter

SSC

The side scatter parameter

APC

Intensity in the APC channel

APC-Cy7

Intensity in the APC-Cy7 channel

PE

Intensity in the PE channel

Source

Artificial


[Package beadplexr version 0.4.0 Index]