anndata-package |
anndata - Annotated Data |
all.equal.AnnDataR6 |
Test if two objects objects are equal |
all.equal.LayersR6 |
Test if two objects objects are equal |
all.equal.RawR6 |
Test if two objects objects are equal |
AnnData |
Create an Annotated Data Matrix |
anndata |
anndata - Annotated Data |
AnnDataR6 |
Create an Annotated Data Matrix |
as.data.frame.AnnDataR6 |
AnnData Helpers |
as.matrix.AnnDataR6 |
AnnData Helpers |
as.matrix.RawR6 |
Raw Helpers |
concat |
concat |
dim.AnnDataR6 |
AnnData Helpers |
dim.RawR6 |
Raw Helpers |
dimnames.AnnDataR6 |
AnnData Helpers |
dimnames.RawR6 |
Raw Helpers |
dimnames<-.AnnDataR6 |
AnnData Helpers |
install_anndata |
Install anndata |
Layers |
Create a Layers object |
LayersR6 |
Create a Layers object |
length.LayersR6 |
Layers Helpers |
names.collections.abc.Mapping |
Convert between Python and R objects |
names.LayersR6 |
Layers Helpers |
py_to_r.anndata._core.aligned_mapping.LayersBase |
Layers Helpers |
py_to_r.anndata._core.anndata.AnnData |
AnnData Helpers |
py_to_r.anndata._core.raw.Raw |
Raw Helpers |
py_to_r.anndata._core.sparse_dataset.SparseDataset |
AnnData Helpers |
py_to_r.collections.abc.KeysView |
Convert between Python and R objects |
py_to_r.collections.abc.Mapping |
Convert between Python and R objects |
py_to_r.collections.abc.Set |
Convert between Python and R objects |
py_to_r.h5py._hl.dataset.Dataset |
AnnData Helpers |
py_to_r.pandas.core.indexes.base.Index |
Convert between Python and R objects |
r-py-conversion |
Convert between Python and R objects |
Raw |
Create a Raw object |
RawR6 |
Create a Raw object |
read_csv |
read_csv |
read_excel |
read_excel |
read_h5ad |
read_h5ad |
read_hdf |
read_hdf |
read_loom |
read_loom |
read_mtx |
read_mtx |
read_text |
read_text |
read_umi_tools |
read_umi_tools |
r_to_py.AnnDataR6 |
AnnData Helpers |
r_to_py.LayersR6 |
Layers Helpers |
r_to_py.RawR6 |
Raw Helpers |
t.AnnDataR6 |
AnnData Helpers |
write_csvs |
Write annotation to .csv files. |
write_h5ad |
Write .h5ad-formatted hdf5 file. |
write_loom |
Write .loom-formatted hdf5 file. |
[.AnnDataR6 |
AnnData Helpers |
[.collections.abc.Mapping |
Convert between Python and R objects |
[.LayersR6 |
Layers Helpers |
[.RawR6 |
Raw Helpers |
[<-.collections.abc.MutableMapping |
Convert between Python and R objects |
[<-.LayersR6 |
Layers Helpers |
[[.collections.abc.Mapping |
Convert between Python and R objects |
[[.LayersR6 |
Layers Helpers |
[[<-.collections.abc.MutableMapping |
Convert between Python and R objects |
[[<-.LayersR6 |
Layers Helpers |