dimnames.RawR6 {anndata} | R Documentation |
Raw Helpers
Description
Raw Helpers
Usage
## S3 method for class 'RawR6'
dimnames(x)
## S3 method for class 'RawR6'
dim(x)
## S3 method for class 'RawR6'
as.matrix(x, ...)
## S3 method for class 'RawR6'
r_to_py(x, convert = FALSE)
## S3 method for class 'anndata._core.raw.Raw'
py_to_r(x)
## S3 method for class 'RawR6'
x[...]
Arguments
x |
An AnnData object. |
... |
Parameters passed to the underlying function. |
convert |
Not used. |
Examples
## Not run:
ad <- AnnData(
X = matrix(c(0, 1, 2, 3, 4, 5), nrow = 2),
obs = data.frame(group = c("a", "b"), row.names = c("s1", "s2")),
var = data.frame(type = c(1L, 2L, 3L), row.names = c("var1", "var2", "var3")),
layers = list(
spliced = matrix(c(4, 5, 6, 7, 8, 9), nrow = 2),
unspliced = matrix(c(8, 9, 10, 11, 12, 13), nrow = 2)
),
obsm = list(
ones = matrix(rep(1L, 10), nrow = 2),
rand = matrix(rnorm(6), nrow = 2),
zeros = matrix(rep(0L, 10), nrow = 2)
),
varm = list(
ones = matrix(rep(1L, 12), nrow = 3),
rand = matrix(rnorm(6), nrow = 3),
zeros = matrix(rep(0L, 12), nrow = 3)
),
uns = list(a = 1, b = 2, c = list(c.a = 3, c.b = 4))
)
ad$raw <- ad
dimnames(ad$raw)
dim(ad$raw)
as.matrix(ad$raw)
ad$raw[2,,drop=FALSE]
ad$raw[,-1]
ad$raw[,c("var1", "var2")]
## End(Not run)
[Package anndata version 0.7.5.6 Index]