addFA |
Add missing FA annotations |
annotateFA |
FA annotation |
blankSubstraction |
substract blank samples. |
changeFArt |
Modify rt peak limits of annotated FAs |
correctNatAb13C |
correct data for natural abundance of 13C using accucor algorithm. |
curateFAannotations |
Modify FA annotations |
dataCorrection |
Data correction for natural abundance of 13C and data normalization using internal standards followed by blank substraction. |
desaturationAnalysis |
Desaturation analysis of fatty acids. |
desaturationsdb |
Desaturation reactions database. |
elongationAnalysis |
Elongation analysis of fatty acids longer than 16 carbons. |
examplefadata |
Example fadata list. |
externalNormalization |
External normalization using additional measures (i.e. protein levels). |
fattyacidsdb |
Fatty Acids database. |
normalizeIS |
Data normalization using internal stardards. |
parameters |
Parameters for FA metabolic analysis. |
plotFA |
Plot FA EICs |
readfadatafile |
read FA data from a csv file. |
removeFA |
Remove incorrect FA annotations |
searchFAisotopes |
Search FA isotopes |
searchIS |
Search internal stardards. |
ssexamplefadata |
Toy example fadata list. |
summarizeResults |
Obtain result tables and heatmaps that help interpreting your results. |
synthesisAnalysis |
De novo synthesis analysis of fatty acids until 16 carbons. |