CACIMAR_cols |
CACIMAR colors palette |
Format_Markers_Frac |
Format marker genes for plotting |
Heatmap_Cor |
plot the heatmap of marker genes across different species |
Identify_CellType |
Identify cell type of each cluster |
Identify_ConservedCellTypes |
Identify conserved cell types based on power of genes and orthologs database |
Identify_ConservedMarkers |
Identify orthologs marker genes for two species |
Identify_ConservedNetworks |
Identify conserved regulatory networks |
Identify_Markers |
Identify markers of each cluster |
OrthG_Hs_Ch |
Orthologs genes database for homo sapiens and zebrafish |
OrthG_Hs_Mm |
Orthologs genes database for homo sapiens and mus musculus |
OrthG_Hs_Zf |
Orthologs genes database for homo sapiens and zebrafish |
OrthG_Mm_Ch |
Orthologs genes database for mus musculus and chicken |
OrthG_Mm_Zf |
Orthologs genes database for mus musculus and zebrafish |
OrthG_Zf_Ch |
Orthologs genes database for mus zebrafish and chicken |
Plot_MarkersHeatmap |
Plot Markers in each cell type |