Generalized Pairwise Comparisons
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Documentation for package ‘BuyseTest’ version 2.4.0
Help Pages
| BuyseTest-package | BuyseTest package: Generalized Pairwise Comparisons |
| .colCenter_cpp | Substract a vector of values in each column |
| .colCumSum_cpp | Column-wise cumulative sum |
| .colMultiply_cpp | Multiply by a vector of values in each column |
| .colScale_cpp | Divide by a vector of values in each column |
| .rowCenter_cpp | Substract a vector of values in each row |
| .rowCumProd_cpp | Apply cumprod in each row |
| .rowCumSum_cpp | Row-wise cumulative sum |
| .rowMultiply_cpp | Multiply by a vector of values in each row |
| .rowScale_cpp | Dividy by a vector of values in each row |
| alloc-method | Methods for the class "BuyseTest.options" |
| as.data.table.performance | Convert Performance Objet to data.table |
| auc | Estimation of the Area Under the ROC Curve (EXPERIMENTAL) |
| autoplot.sensitivity | Graphical Display for Sensitivity Analysis |
| boot2pvalue | Compute the p.value from the distribution under H1 |
| BuyseMultComp | Adjustment for Multiple Comparisons |
| BuyseTest | Generalized Pairwise Comparisons (GPC) |
| BuyseTest.options | Global options for BuyseTest package |
| BuyseTest.options-class | Class "BuyseTest.options" (global setting for the BuyseTest package) |
| BuyseTest.options-methods | Methods for the class "BuyseTest.options" |
| BuyseTTEM | Time to Event Model |
| BuyseTTEM.BuyseTTEM | Time to Event Model |
| BuyseTTEM.formula | Time to Event Model |
| BuyseTTEM.prodlim | Time to Event Model |
| BuyseTTEM.survreg | Time to Event Model |
| coef-method | Coef Method for Class "S4BuyseTest" |
| coef.BuyseTestAuc | Extract the AUC Value |
| coef.BuyseTestBrier | Extract the Brier Score |
| confint-method | Confidence Intervals for Model Parameters |
| confint.BuyseTestAuc | Extract the AUC value with its Confidence Interval |
| confint.BuyseTestBrier | Extract the Brier Score with its Confidence Interval |
| constStrata | Strata creation |
| discreteRoot | Dichotomic search for monotone function |
| getCount | Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs |
| getCount-method | Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs |
| getIid | Extract the H-decomposition of the Estimator |
| getIid-method | Extract the H-decomposition of the Estimator |
| getPairScore | Extract the Score of Each Pair |
| getPairScore-method | Extract the Score of Each Pair |
| getPseudovalue | Extract the pseudovalues of the Estimator |
| getPseudovalue-method | Extract the pseudovalues of the Estimator |
| getSurvival | Extract the Survival and Survival Jumps |
| getSurvival-method | Extract the Survival and Survival Jumps |
| GPC2_cpp | C++ function performing the pairwise comparison over several endpoints. |
| GPC_cpp | C++ function performing the pairwise comparison over several endpoints. |
| iid.BuyseTestAuc | Extract the idd Decomposition for the AUC |
| iid.BuyseTestBrier | Extract the idd Decomposition for the Brier Score |
| iid.prodlim | Extract i.i.d. decomposition from a prodlim model |
| performance | Assess Performance of a Classifier |
| performanceResample | Uncertainty About Performance of a Classifier (EXPERIMENTAL) |
| powerBuyseTest | Performing simulation studies with BuyseTest |
| predict.BuyseTTEM | Prediction with Time to Event Model |
| rbind.performance | Combine Resampling Results For Performance Objects |
| S4BuysePower-class | Class "S4BuysePower" (output of BuyseTest) |
| S4BuysePower-show | Show Method for Class "S4BuysePower" |
| S4BuysePower-summary | Summary Method for Class "S4BuysePower" |
| S4BuyseTest-class | Class "S4BuyseTest" (output of BuyseTest) |
| S4BuyseTest-coef | Coef Method for Class "S4BuyseTest" |
| S4BuyseTest-confint | Confidence Intervals for Model Parameters |
| S4BuyseTest-getCount | Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs |
| S4BuyseTest-getIid | Extract the H-decomposition of the Estimator |
| S4BuyseTest-getPairScore | Extract the Score of Each Pair |
| S4BuyseTest-getPseudovalue | Extract the pseudovalues of the Estimator |
| S4BuyseTest-getSurvival | Extract the Survival and Survival Jumps |
| S4BuyseTest-sensitivity | Sensitivity Analysis for the Choice of the Thresholds |
| S4BuyseTest-show | Show Method for Class "S4BuyseTest" |
| S4BuyseTest-summary | Summary Method for Class "S4BuyseTest" |
| select-method | Methods for the class "BuyseTest.options" |
| sensitivity | Sensitivity Analysis for the Choice of the Thresholds |
| sensitivity-method | Sensitivity Analysis for the Choice of the Thresholds |
| show-method | Show Method for Class "S4BuysePower" |
| show-method | Show Method for Class "S4BuyseTest" |
| simBuyseTest | Simulation of data for the BuyseTest |
| simCompetingRisks | Simulation of Gompertz competing risks data for the BuyseTest |
| Simulate endpoints for GPC | Simulation of data for the BuyseTest |
| summary-method | Summary Method for Class "S4BuysePower" |
| summary-method | Summary Method for Class "S4BuyseTest" |
| summary.performance | Summary Method for Performance Objects |