Generalized Pairwise Comparisons


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Documentation for package ‘BuyseTest’ version 2.3.0

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BuyseTest-package BuyseTest package: Generalized Pairwise Comparisons
.colCenter_cpp Substract a vector of values in each column
.colMultiply_cpp Multiply by a vector of values in each column
.colScale_cpp Divide by a vector of values in each column
.rowCenter_cpp Substract a vector of values in each row
.rowCumProd_cpp Apply cumprod in each row
.rowCumSum_cpp Apply cumsum in each column
.rowMultiply_cpp Multiply by a vector of values in each row
.rowScale_cpp Dividy by a vector of values in each row
alloc-method Methods for the class "BuyseTest.options"
auc Estimation of the Area Under the ROC Curve
autoplot.sensitivity Graphical Display for Sensitivity Analysis
boot2pvalue Compute the p.value from the distribution under H1
BuyseTest Generalized Pairwise Comparisons (GPC)
BuyseTest.options Global options for BuyseTest package
BuyseTest.options-class Class "BuyseTest.options" (global setting for the BuyseTest package)
BuyseTest.options-methods Methods for the class "BuyseTest.options"
BuyseTTEM Time to Event Model
BuyseTTEM.BuyseTTEM Time to Event Model
BuyseTTEM.formula Time to Event Model
BuyseTTEM.prodlim Time to Event Model
BuyseTTEM.survreg Time to Event Model
coef-method Coef Method for Class "S4BuyseTest"
coef.BuyseTestAuc Extract the AUC Value
confint-method Confidence Intervals for Model Parameters
confint.BuyseTestAuc Extract the AUC value with its Confidence Interval
constStrata Strata creation
discreteRoot Dichotomic search for monotone function
getCount Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs
getCount-method Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs
getIid Extract the H-decomposition of the Estimator
getIid-method Extract the H-decomposition of the Estimator
getPairScore Extract the Score of Each Pair
getPairScore-method Extract the Score of Each Pair
getPseudovalue Extract the pseudovalues of the Estimator
getPseudovalue-method Extract the pseudovalues of the Estimator
getSurvival Extract the Survival and Survival Jumps
getSurvival-method Extract the Survival and Survival Jumps
GPC2_cpp C++ function performing the pairwise comparison over several endpoints.
GPC_cpp C++ function performing the pairwise comparison over several endpoints.
iid.prodlim Extract i.i.d. decomposition from a prodlim model
powerBuyseTest Performing simulation studies with BuyseTest
predict.BuyseTTEM Prediction with Time to Event Model
S4BuysePower-class Class "S4BuysePower" (output of BuyseTest)
S4BuysePower-show Show Method for Class "S4BuysePower"
S4BuysePower-summary Summary Method for Class "S4BuysePower"
S4BuyseTest-class Class "S4BuyseTest" (output of BuyseTest)
S4BuyseTest-coef Coef Method for Class "S4BuyseTest"
S4BuyseTest-confint Confidence Intervals for Model Parameters
S4BuyseTest-getCount Extract the Number of Favorable, Unfavorable, Neutral, Uninformative pairs
S4BuyseTest-getIid Extract the H-decomposition of the Estimator
S4BuyseTest-getPairScore Extract the Score of Each Pair
S4BuyseTest-getPseudovalue Extract the pseudovalues of the Estimator
S4BuyseTest-getSurvival Extract the Survival and Survival Jumps
S4BuyseTest-sensitivity Sensitivity Analysis for the Choice of the Thresholds
S4BuyseTest-show Show Method for Class "S4BuyseTest"
S4BuyseTest-summary Summary Method for Class "S4BuyseTest"
select-method Methods for the class "BuyseTest.options"
sensitivity Sensitivity Analysis for the Choice of the Thresholds
sensitivity-method Sensitivity Analysis for the Choice of the Thresholds
show-method Show Method for Class "S4BuysePower"
show-method Show Method for Class "S4BuyseTest"
simBuyseTest Simulation of data for the BuyseTest
simCompetingRisks Simulation of Gompertz competing risks data for the BuyseTest
Simulate endpoints for GPC Simulation of data for the BuyseTest
summary-method Summary Method for Class "S4BuysePower"
summary-method Summary Method for Class "S4BuyseTest"