Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis

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Documentation for package ‘AutoPipe’ version 0.1.6

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AutoPipe_tSNE Implemented t-distributed stochastic neighbor embedding
cons_clust A function to plot do a Consensus clustering to validate the results
Groups_Sup cluster the samples
read_expression_file Input Expression File
rna rna egene expression of 48 meningiomas
Supervised_Cluster_Heatmap Produce a Heatmap using a Supervised clustering Algorithm
TopPAM Compute Top genes
top_supervised A Function for Assisting Supervised Clustering
UnSuperClassifier Unsupervised Clustering