read_expression_file {AutoPipe}

Input Expression File

Description

This function is used to upload a table into R for further use in the AutoPipe

Usage

read_expression_file(file, format = "csv", sep=";",gene_name="SYMBOL", Trans=FALSE)

Arguments

file

The path of the expression table

format

The format of the table "csv" or "txt"

sep

The seperator of the input table

gene_name

Genes are given in "SYMBOL" or "ENTREZID"

Trans

Need Matrix Transpose TRUE or FALSE

Value

A data.frame with a gene expression matrix