smoke-package |
Small Molecule Octet/BLI Kinetics Experiment |
alignLoad |
Align BLI traces with loading step |
alignLoad-method |
~~ Methods for Function 'alignLoad' ~~ |
alignLoad-methods |
~~ Methods for Function 'alignLoad' ~~ |
baseline |
Align BLI traces with baseline step |
baseline-method |
~~ Methods for Function 'baseline' ~~ |
baseline-methods |
~~ Methods for Function 'baseline' ~~ |
Bli |
Constructor of "Bli" class |
bli |
BLI data example |
Bli-class |
Class '"Bli"' |
doubleBlank |
Substract the double-references |
doubleBlank-method |
~~ Methods for Function 'doubleBlank' ~~ |
doubleBlank-methods |
~~ Methods for Function 'doubleBlank' ~~ |
estimate |
Estimate initial kinetic parameters |
estimate-method |
~~ Methods for Function 'estimate' ~~ |
estimate-methods |
~~ Methods for Function 'estimate' ~~ |
fitKinetics |
Fit binding kinetics |
fitKinetics-method |
~~ Methods for Function 'fitKinetics' ~~ |
fitKinetics-methods |
~~ Methods for Function 'fitKinetics' ~~ |
initialize-method |
~~ Methods for Function 'initialize' ~~ |
initialize-methods |
~~ Methods for Function 'initialize' ~~ |
kinetics |
Output kinetics model |
kinetics-method |
~~ Methods for Function 'kinetics' ~~ |
kinetics-methods |
~~ Methods for Function 'kinetics' ~~ |
kOff0 |
Getter for "Bli" slot of 'kOff0' |
kOff0-method |
~~ Methods for Function 'kOff0' ~~ |
kOff0-methods |
~~ Methods for Function 'kOff0' ~~ |
kOff0<- |
Setter for "Bli" slot of 'kOff0' |
kOff0<--method |
~~ Methods for Function 'kOff0<-' ~~ |
kOff0<--methods |
~~ Methods for Function 'kOff0<-' ~~ |
kOn0 |
Getter for "Bli" slot of 'kOn0' |
kOn0-method |
~~ Methods for Function 'kOn0' ~~ |
kOn0-methods |
~~ Methods for Function 'kOn0' ~~ |
kOn0<- |
Setter for "Bli" slot of 'kOn0' |
kOn0<--method |
~~ Methods for Function 'kOn0<-' ~~ |
kOn0<--methods |
~~ Methods for Function 'kOn0<-' ~~ |
ligand |
Getter for "Bli" slot of ligand concentration |
ligand-method |
~~ Methods for Function 'ligand' ~~ |
ligand-methods |
~~ Methods for Function 'ligand' ~~ |
ligand<- |
Setter for "Bli" slot of ligand concentration |
ligand<--method |
~~ Methods for Function 'ligand<-' ~~ |
ligand<--methods |
~~ Methods for Function 'ligand<-' ~~ |
nls-class |
Class 'nls' |
plotKinetics |
Plot kinetics model fitting |
plotKinetics-method |
~~ Methods for Function 'plotKinetics' ~~ |
plotKinetics-methods |
~~ Methods for Function 'plotKinetics' ~~ |
plotResiduals |
Plot residuals from kinetics model fitting |
plotResiduals-method |
~~ Methods for Function 'plotResiduals' ~~ |
plotResiduals-methods |
~~ Methods for Function 'plotResiduals' ~~ |
plotTraces |
Plot BLI traces |
plotTraces-method |
~~ Methods for Function 'plotTraces' ~~ |
plotTraces-methods |
~~ Methods for Function 'plotTraces' ~~ |
show-method |
~~ Methods for Function 'show' ~~ |
show-methods |
~~ Methods for Function 'show' ~~ |
smoke |
Small Molecule Octet/BLI Kinetics Experiment |
status |
Getter for data processing 'status' |
status-method |
~~ Methods for Function 'status' ~~ |
status-methods |
~~ Methods for Function 'status' ~~ |
tExp |
Getter for BLI times 'tExp' |
tExp-method |
~~ Methods for Function 'tExp' ~~ |
tExp-methods |
~~ Methods for Function 'tExp' ~~ |
tExp<- |
Setter for BLI times 'tExp' |
tExp<--method |
~~ Methods for Function 'tExp<-' ~~ |
tExp<--methods |
~~ Methods for Function 'tExp<-' ~~ |
traces |
Getter of BLI 'traces' |
traces-method |
~~ Methods for Function 'traces' ~~ |
traces-methods |
~~ Methods for Function 'traces' ~~ |
traces<- |
Setter of BLI 'traces' |
traces<--method |
~~ Methods for Function 'traces<-' ~~ |
traces<--methods |
~~ Methods for Function 'traces<-' ~~ |