Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects


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Documentation for package ‘sensmediation’ version 0.3.0

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calc.effects Function for estimation of natural direct and indirect effects and sensitivity analysis for unobserved mediator-outcome confounding
coefs.sensmed ML estimation of regression parameters for calculation of direct and indirect effects under unobserved confounding
eff.bb Functions to calculate natural direct and indirect effects.
eff.bc Functions to calculate natural direct and indirect effects.
eff.cb Functions to calculate natural direct and indirect effects.
eff.cc Functions to calculate natural direct and indirect effects.
effects Functions to calculate natural direct and indirect effects.
grr Analytic gradients of the loglikelihood functions for ML estimation of regression parameters
grr.bb Analytic gradients of the loglikelihood functions for ML estimation of regression parameters
grr.bc Analytic gradients of the loglikelihood functions for ML estimation of regression parameters
grr.cb Analytic gradients of the loglikelihood functions for ML estimation of regression parameters
grr.cc Analytic gradients of the loglikelihood functions for ML estimation of regression parameters
hess Analytic Hessians of the loglikelihood functions for ML estimation of regression parameters
hess.bb Analytic Hessians of the loglikelihood functions for ML estimation of regression parameters
hess.bc Analytic Hessians of the loglikelihood functions for ML estimation of regression parameters
hess.cb Analytic Hessians of the loglikelihood functions for ML estimation of regression parameters
hess.cc Analytic Hessians of the loglikelihood functions for ML estimation of regression parameters
LogL Implementation of loglikelihood functions for ML estimation of regression parameters
LogL.bb Implementation of loglikelihood functions for ML estimation of regression parameters
LogL.bc Implementation of loglikelihood functions for ML estimation of regression parameters
LogL.cb Implementation of loglikelihood functions for ML estimation of regression parameters
LogL.cc Implementation of loglikelihood functions for ML estimation of regression parameters
ML Functions for ML estimation of regression parameters for sensitivity analysis
ML.bb Functions for ML estimation of regression parameters for sensitivity analysis
ML.bc Functions for ML estimation of regression parameters for sensitivity analysis
ML.cb Functions for ML estimation of regression parameters for sensitivity analysis
ML.cc Functions for ML estimation of regression parameters for sensitivity analysis
more.effects Estimate additional natural direct and indirect effects based on an '"effectsMed"' object
partdevs Implementations of the partial derivatives (gradients) of the expressions for the direct, indirect and total effects. Used to calculate standard errors (delta method).
partdevs.bb Implementations of the partial derivatives (gradients) of the expressions for the direct, indirect and total effects. Used to calculate standard errors (delta method).
partdevs.bc Implementations of the partial derivatives (gradients) of the expressions for the direct, indirect and total effects. Used to calculate standard errors (delta method).
partdevs.cb Implementations of the partial derivatives (gradients) of the expressions for the direct, indirect and total effects. Used to calculate standard errors (delta method).
partdevs.cc Implementations of the partial derivatives (gradients) of the expressions for the direct, indirect and total effects. Used to calculate standard errors (delta method).
plot.effectsMed Plot function for objects of class '"effectsMed"'
print.summaryeffectsMed Summary function for objects of class '"effectsMed"'
RSdata Example data for the functions in sensmediation
sensmediation Estimate natural direct and indirect effects based on parametric regression models and perform sensitivity analysis
stderr.bb Functions to calculate standard errors of the direct, indirect and total effects using the delta method.
stderr.bc Functions to calculate standard errors of the direct, indirect and total effects using the delta method.
stderr.cb Functions to calculate standard errors of the direct, indirect and total effects using the delta method.
stderr.cc Functions to calculate standard errors of the direct, indirect and total effects using the delta method.
stderrs Functions to calculate standard errors of the direct, indirect and total effects using the delta method.
summary.effectsMed Summary function for objects of class '"effectsMed"'