Sampling Design for Spatially Explicit Capture-Recapture


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Documentation for package ‘secrdesign’ version 2.9.1

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secrdesign-package Spatially Explicit Capture-Recapture Study Design
c.estimatetables Combine Simulation Output
c.selectedstatistics Combine Simulation Output
coef Extract Estimates From Fitted Models
coef.fittedmodels Extract Estimates From Fitted Models
coef.summary Extract Summaries
compactSample Internal Functions
costing Cost of SECR design
count Extract Summaries
count.summary Extract Summaries
derived Extract Estimates From Fitted Models
derived.fittedmodels Extract Estimates From Fitted Models
En2 Expected Detections
Enrm Expected Detections
estimateArray Direct summary of estimate tables
estimateSummary Direct summary of estimate tables
expand.arg Expand Argument List
find.param Select Statistics to Summarize
find.stats Select Statistics to Summarize
fit.models Simulate Sampling Designs
GAoptim SECR detector placement by maximisation of a simple criterion
GApenfn Internal Functions
getdetectpar Ballpark Detection Parameters
header Generic Methods for secrdesign Objects
Lambda Expected Detections
make.array Re-cast Simulated Statistical Output as Array
make.scenarios Construct Scenario Data Frame
minnrRSE Expected Detections
optimalSpacing Optimal Detector Spacing
outputtype Internal Functions
outputtype<- Internal Functions
plot.optimalSpacing Plot and print methods for optimalSpacing object
plot.selectedstatistics Generic Methods for secrdesign Objects
predict Extract Estimates From Fitted Models
predict.fittedmodels Extract Estimates From Fitted Models
predict.summary Extract Summaries
print.optimalSpacing Plot and print methods for optimalSpacing object
Qpm Expected Detections
rbind.estimatetables Combine Simulation Output
rbind.selectedstatistics Combine Simulation Output
region.N Extract Estimates From Fitted Models
region.N.fittedmodels Extract Estimates From Fitted Models
run.scenarios Simulate Sampling Designs
saturation Detector saturation
scenariosFromStatistics Make Scenarios to Match Capture Statistics
scenarioSummary Summary of Scenarios
secrdesign Spatially Explicit Capture-Recapture Study Design
select.stats Select Statistics to Summarize
summary.estimatetables Generic Methods for secrdesign Objects
summary.rawdata Generic Methods for secrdesign Objects
summary.secrdesign Generic Methods for secrdesign Objects
summary.selectedstatistics Generic Methods for secrdesign Objects
transformOutput Transform Simulation Output
validate Reject Implausible Statistics