| dataisl |
West Mediterranean island butterflies provided with the package recluster |
| datamod |
Virtual island faunas provided with the package recluster |
| multiboot |
A multiboot result obtained with the dataisl dataset. |
| reCluster |
Ordination methods for biodiversity patterns. |
| recluster |
Ordination methods for biodiversity patterns. |
| recluster.boot |
Bootstrap nodes of consensus trees |
| recluster.col |
Projecting a two dimensional plot in RGB space |
| recluster.cons |
Consensus tree among re-sampled trees |
| recluster.dist |
Compute a dissimilarity matrix using a battery of beta-diversity indices |
| recluster.expl |
Computes the dissimilarity contained in a distance matrix which is explained by a clustering solution. |
| recluster.expl.diss |
Cuts a phylogenetic tree to a given series of nodes and computes explained dissimilarity. |
| recluster.fst |
Compute some indexes of genetic differentiation |
| recluster.fst.pair |
Compute pairwise indexes of genetic differentiation among populations |
| recluster.group.col |
Computes mean coordinate values and RGB colours. |
| recluster.hist |
Histogram of dissimilarity with tied and zero values |
| recluster.identify.nodes |
Evaluating solutions in multiscale bootstrap |
| recluster.line |
Identifies a line in a configuration and computes its intercept and angular coefficient |
| recluster.multi |
Multiscale bootstrap based on a consensus tree |
| recluster.node.strength |
Evaluating order row bias in a cluster |
| recluster.plot |
A plotter for recluster bootstrapped objects |
| recluster.plot.col |
Plotting data in RGB space |
| recluster.plot.matrix |
Plot the values of the cells of a matrix in grey scale |
| recluster.plot.pie |
Plotting pies with RGB colours on a custom coordinate space |
| recluster.plot.sites.col |
Plotting RGB dots on a custom coordinate space |
| recluster.procrustes |
Computes a procrustes analysis between two matrices even if only a subset of cases are shared. |
| recluster.region |
A new clustering method based on continuous consensus. |
| recluster.rotate |
Rotates a bidimensional configuration according to a line |
| recluster.test.dist |
Test variation lost by a bidimensional configuration when the coordinates of the elements are reduced to the configuration of the barycentres of a given series of groups. |
| treebut |
Phylogenetic tree for the butterfly species included in dataisl dataset |
| treemod |
Hypothetical phylogenetic tree for the virtual island faunas provided with the package recluster |
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