preseqR-package |
Predicting r-species accumulation curves |
bbc.rSAC |
BBC estimator |
cs.rSAC |
CS estimator |
Dickens |
Dickens' vocabulary |
ds.rSAC |
RFA estimator |
ds.rSAC.bootstrap |
RFA estimator with bootstrap |
fisher.alpha |
Parameter alpha in the logseries estimator |
fisher.rSAC |
Logseries estimator |
FisherButterfly |
Fisher's butterfly data |
kmer.frac.curve |
Fraction of k-mers observed at least r times |
kmer.frac.curve.bootstrap |
Fraction of k-mers observed at least r times with bootstrap |
preseqR.interpolate.rSAC |
Interpolation |
preseqR.nonreplace.sampling |
Sampling |
preseqR.optimal.sequencing |
Optimal amount of sequencing for scWGS |
preseqR.rSAC |
Best practice for r-SAC - a fast version |
preseqR.rSAC.bootstrap |
Best practice for r-SAC |
preseqR.rSAC.sequencing.rmdup |
Predicting r-SAC in WES/WGS |
preseqR.sample.cov |
Predicting generalized sample coverage |
preseqR.sample.cov.bootstrap |
Predicting generalized sample coverage with bootstrap |
preseqR.simu.hist |
Simulation |
preseqR.ztnb.em |
Fitting a zero-truncated negative binomial distribution |
Shakespeare |
Shakespeare's word type frequencies |
SRR061157_k31 |
k-mer counts of a metagenomic data |
SRR1301329_1M_base |
Coverage histogram of a WES data |
SRR1301329_1M_read |
Read counts of a WES data |
SRR1301329_base |
Coverage histogram of a WES data |
SRR1301329_read |
Read counts of a WES data |
SRR611492 |
Coverage histogram of a scWGS data |
SRR611492_5M |
Coverage histogram of a scWGS data |
Twitter |
Social network |
WillButterfly |
Fisher's butterfly data |
ztnb.rSAC |
ZTNB estimator |
ztp.rSAC |
ZTP estimator |