SRR061157_k31 {preseqR} | R Documentation |
k
-mer counts of a metagenomic data
Description
The k
-mer counts are based on a metagenome sequencing data from
Human Microbiome Project with the accession number
SRR061157. Only forward reads are used to generate the k
-mer counts.
Details
A two-column matrix.
The first column is the frequency j = 1,2,\dots
; and the second column
is N_j
, the number of 31-mers observed exactly j
times.
References
Human Microbiome Project (https://hmpdacc.org/).
Examples
##load library
library(preseqR)
##load data
data(SRR061157_k31)
[Package preseqR version 4.0.0 Index]