allActograms |
Generate actograms |
allPeriodogramsAct |
Periodogram analysis for activity data |
allPeriodogramsSleep |
Periodogram analysis for sleep data |
allSomnograms |
Generate actograms for sleep data (Somnograms) |
anticipationAct |
Compute anticipation for activity data |
binData |
Bin activity data to desired intervals |
CoM |
Objectively quantify and visualise phases and calculate consolidation in pre-defined time-windows |
df |
Example DAM data |
indActogram |
Plot actogram of individual fly |
indPeriodogramAct |
Periodogram plot for activity data of individual flies |
indPeriodogramSleep |
Periodogram plot for sleep data of individual flies |
indSomnogram |
Generate actograms for sleep data (Somnograms) for individual flies |
peakIdentifier |
Phase identifier for activity data |
profilesAct |
Compute and plot activity profiles |
profilesSleep |
Compute and plot sleep profiles |
rosePlotsAct |
Generate rose plots for averaged activity data |
rosePlotsSleep |
Generate rose plots for averaged sleep data |
sleepData |
Equivalent of binData() but for sleep data |
sleepOnsetBoutLength |
Computes, tabulates and plots day-time and night-time onset of sleep bouts and their respective lengths |
sleepStages |
Plot sleep stages in individual flies |
sleepStat |
Computes and tabulates day-time and night-time sleep statistics |
transitionProbs |
Plot and generate data for transition frequencies between sleep stages |
trimData |
Trim data for downstream analyses |