| allActograms {phase} | R Documentation |
Generate actograms
Description
This function generates a composite figure with actograms for all flies in a DAM scanned monitor file. Input for this function must be an output from the binData() function. The output of this function is a large plotly object. This function requires the packages "plotly" and "zoo".
Usage
allActograms(data, bin = 30, t.cycle = 24, color = rgb(0, 0, 0, 1))
Arguments
data |
Input data file. The input for this function must be the output of the function binData(). See ??binData(). |
bin |
Intervals in which data are saved (in minutes). This defaults to 30. |
t.cycle |
Define the period of the environmental cycle or a single day in hours. This defaults to 24. |
color |
Color of actograms in rgb format. The input for this must be a vector with 4 values, i.e., r,g,b,transparency. The values for r,g,b can only be between 0 and 1. 0,0,0 would be black and 1,1,1 would be white. Transparency values can also go from 0 to 1, 0 being fully transparent and 1 being fully opaque. |
Value
A plotly htmlwidget with 32 actograms in a 4-by-8 array.
Examples
td <- trimData(data = df, start.date = "19 Dec 20", start.time = "21:00",
n.days = 3, bin = 1, t.cycle = 24)
bd <- binData(data = td)
actograms <- allActograms(data = bd)