auc |
Calculate area under the curve |
block_tidydesign |
Turn tidydesign into block format |
calc_deriv |
Calculate derivatives of vector of data |
centroid |
Calculate centroid |
CentroidFunctions |
Calculate centroid |
centroid_both |
Calculate centroid |
centroid_x |
Calculate centroid |
centroid_y |
Calculate centroid |
doubling_time |
Calculate doubling time equivalent of per-capita growth rate |
example_design_tidy |
Design for example growth curve data A tidy-shaped dataset with the experimental design (i.e. plate layout) for the example data included with 'gcplyr'. |
example_widedata |
Example noisy growth curve data in wide format |
example_widedata_noiseless |
Example growth curve data in wide format |
ExtremaFunctions |
Find local extrema of a numeric vector |
extr_val |
Extract parts of an object |
find_local_extrema |
Find local extrema of a numeric vector |
find_threshold_crosses |
Find point(s) when a numeric vector crosses some threshold |
first_above |
Find point(s) when a numeric vector crosses some threshold |
first_below |
Find point(s) when a numeric vector crosses some threshold |
first_maxima |
Find local extrema of a numeric vector |
first_minima |
Find local extrema of a numeric vector |
first_peak |
Find the first local maxima of a numeric vector |
from_excel |
A function that converts base-26 Excel-style letters to numbers |
gc_smooth.spline |
Fit a Smoothing Spline |
import_blockdesigns |
Import blockdesigns |
import_blockmeasures |
Import blockmeasures |
lag_time |
Calculate lag time |
makemethod_train_smooth_data |
Create method argument for train of growth curve smoothers |
make_design |
Make design data.frame(s) |
make_designpattern |
Make design pattern |
make_example |
Create R objects or files as seen in vignette examples |
make_tidydesign |
Make tidy design data.frames |
max_gc |
Maxima and Minima |
mdp |
Make design pattern |
merge_dfs |
Collapse a list of dataframes, or merge two dataframes together |
MinMaxGC |
Maxima and Minima |
min_gc |
Maxima and Minima |
MovingWindowFunctions |
Moving window smoothing |
moving_average |
Moving window smoothing |
moving_median |
Moving window smoothing |
paste_blocks |
Paste a list of blocks into a single block |
predict_interpolation |
Predict data by linear interpolation from existing data |
print_df |
Nicely print the contents of a data.frame |
read_blocks |
Read blocks |
read_tidys |
Read tidy-shaped files |
read_wides |
Read wides |
separate_tidy |
Separate a column into multiple columns |
smooth_data |
Smooth data |
solve_linear |
Return missing information about a line |
ThresholdFunctions |
Find point(s) when a numeric vector crosses some threshold |
to_excel |
A function that converts numbers into base-26 Excel-style letters |
train_smooth_data |
Test efficacy of different smoothing parameters |
trans_block_to_wide |
Transform blocks to wides |
trans_wide_to_tidy |
Pivot widemeasures longer |
uninterleave |
Uninterleave list |
WhichMinMaxGC |
Where is the Min() or Max() or first TRUE or FALSE? |
which_max_gc |
Where is the Min() or Max() or first TRUE or FALSE? |
which_min_gc |
Where is the Min() or Max() or first TRUE or FALSE? |
write_blocks |
Write block designs to csv |