$-method |
Attribute accessor |
$-method |
Attribute accessor |
$-method |
Attribute accessor |
enve.barplot |
Enveomics: Barplot |
enve.cliopts |
Enveomics: Cliopts |
enve.col.alpha |
Enveomics: Color Alpha |
enve.col2alpha |
Enveomics: Color to Alpha (deprecated) |
enve.df2dist |
Enveomics: Data Frame to Dist |
enve.df2dist.group |
Enveomics: Data Frame to Dist (Group) |
enve.df2dist.list |
Enveomics: Data Frame to Dist (List) |
enve.GrowthCurve |
Enveomics: Growth Curve S4 Class |
enve.growthcurve |
Enveomics: Growth Curve |
enve.GrowthCurve-class |
Enveomics: Growth Curve S4 Class |
enve.prefscore |
Enveomics: Pref Score |
enve.prune.dist |
Enveomics: Prune Dist |
enve.recplot |
Enveomics: Recruitment Plots |
enve.RecPlot2 |
Enveomics: Recruitment Plot (2) - S4 Class |
enve.recplot2 |
Enveomics: Recruitment Plot (2) |
enve.RecPlot2-class |
Enveomics: Recruitment Plot (2) - S4 Class |
enve.recplot2.ANIr |
Enveomics: Recruitment Plot (2) ANI Estimate |
enve.recplot2.changeCutoff |
Enveomics: Recruitment Plot (2) Change Cutoff |
enve.recplot2.compareIdentities |
Enveomics: Recruitment Plot (2) Compare Identities |
enve.recplot2.coordinates |
Enveomics: Recruitment Plot (2) Coordinates |
enve.recplot2.corePeak |
Enveomics: Recruitment Plot (2) Core Peak Finder |
enve.recplot2.extractWindows |
Enveomics: Recruitment Plot (2) Extract Windows |
enve.recplot2.findPeaks |
Enveomics: Recruitment Plot (2) Peak Finder |
enve.recplot2.findPeaks.em |
Enveomics: Recruitment Plot (2) Em Peak Finder |
enve.recplot2.findPeaks.emauto |
Enveomics: Recruitment Plot (2) Emauto Peak Finder |
enve.recplot2.findPeaks.mower |
Enveomics: Recruitment Plot (2) Mowing Peak Finder |
enve.recplot2.findPeaks.__emauto_one |
Enveomics: Recruitment Plot (2) EMauto Peak Finder - Internal Ancillary Function |
enve.recplot2.findPeaks.__em_e |
Enveomics: Recruitment Plot (2) EM Peak Finder - Internal Ancillary Function Expectation |
enve.recplot2.findPeaks.__em_m |
Enveomics: Recruitment Plot (2) Em Peak Finder - Internal Ancillary Function Maximization |
enve.recplot2.findPeaks.__mower |
Enveomics: Recruitment Plot (2) Mowing Peak Finder - Internal Ancillary Function 2 |
enve.recplot2.findPeaks.__mow_one |
Enveomics: Recruitment Plot (2) Mowing Peak Finder - Internal Ancillary Function 1 |
enve.RecPlot2.Peak |
Enveomics: Recruitment Plot (2) Peak - S4 Class |
enve.RecPlot2.Peak-class |
Enveomics: Recruitment Plot (2) Peak - S4 Class |
enve.recplot2.seqdepth |
Enveomics: Recruitment Plot (2) Sequencing Depth |
enve.recplot2.windowDepthThreshold |
Enveomics: Recruitment Plot (2) Window Depth Threshold |
enve.recplot2.__counts |
Enveomics: Recruitment Plot (2) Internal Ancillary Function |
enve.recplot2.__peakHist |
Enveomics: Recruitment Plot (2) Peak S4 Class - Internal Ancillary Function |
enve.recplot2.__whichClosestPeak |
Enveomics: Recruitment Plot (2) Peak Finder - Internal Ancillary Function |
enve.selvector |
Enveomics: Selection vector |
enve.TRIBS |
Enveomics: TRIBS S4 Class |
enve.tribs |
Enveomics: TRIBS |
enve.TRIBS-class |
Enveomics: TRIBS S4 Class |
enve.TRIBS.merge |
Enveomics: TRIBS Merge |
enve.tribs.test |
Enveomics: TRIBS Test |
enve.TRIBStest |
Enveomics: TRIBS Test S4 Class |
enve.TRIBStest-class |
Enveomics: TRIBS Test S4 Class |
enve.truncate |
Enveomics: Truncate |
enve.__prune.iter |
Enveomics: Prune Iter (Internal Function) |
enve.__prune.reduce |
Enveomics: Prune Reduce (Internal Function) |
enve.__tribs |
Enveomics: TRIBS - Internal Ancillary Function |
growth.curves |
Bacterial growth curves for three Escherichia coli mutants |
phyla.counts |
Counts of microbial phyla in four sites |
plot.enve.GrowthCurve |
Enveomics: Plot of Growth Curve |
plot.enve.RecPlot2 |
Enveomics: Recruitment Plot (2) |
plot.enve.TRIBS |
Enveomics: TRIBS Plot |
plot.enve.TRIBStest |
Enveomics: TRIBS Plot Test |
summary.enve.GrowthCurve |
Enveomics: Summary of Growth Curve |
summary.enve.TRIBS |
Enveomics: TRIBS Summary |
summary.enve.TRIBStest |
Enveomics: TRIBS Summary Test |