Dissimilarity-Based Functions for Ecological Analysis

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Documentation for package ‘ecodist’ version 2.1.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

ecodist-package	Dissimilarity-Based Functions for Ecological Analysis
addord	Fit new points to an existing NMDS configuration.
bcdist	Bray-Curtis distance
bump	Nine-bump spatial pattern
bump.pmgram	Nine-bump spatial pattern
cor2m	Two-matrix correlation table
corgen	Generate correlated data
crosstab	Data formatting
dim.dist	Dimension of a distance object
distance	Calculate dissimilarity/distance metrics
ecodist	Dissimilarity-Based Functions for Ecological Analysis
fixdmat	Distance matrix conversion
full	Full symmetric matrix
graze	Site information and grazed vegetation data.
iris.fit	Example of adding to an ordination
iris.nmds	Example for nmds
iris.vf	Example for vector fitting on ordination
iris.vfrot	Example for vector fitting on rotated ordination
lower	Lower-triangular matrix
mantel	Mantel test
mgram	Mantel correlogram
mgroup	Mantel test for groups
min.nmds	Find minimum stress configuration
MRM	Multiple Regression on distance Matrices
nmds	Non-metric multidimensional scaling
nmds.min	Find minimum stress configuration
pathdist	Graph extension of dissimilarities
pco	Principal coordinates analysis
plot.mgram	Plot a Mantel correlogram
plot.nmds	Plot information about NMDS ordination
plot.vf	Plots fitted vectors onto an ordination diagram
pmgram	Piecewise multivariate correlogram
relrange	Relativize a compositional data matrix.
residuals.mgram	Residuals of a Mantel correlogram
rotate2d	Rotate a 2D ordination.
vf	Vector fitting
xdistance	Cross-distance between two datasets.
xmantel	Cross-Mantel test
xmgram	Cross-Mantel correlogram
z.no	Example for pmgram
z.z1	Example for pmgram