dsm-package |
Density surface modelling |
block.info.per.su |
Find the block information |
check.cols |
Check column names exist |
distdata |
Pan-tropical spotted dolphins in the Gulf of Mexico |
dsm |
Fit a density surface model to segment-specific estimates of abundance or density. |
dsm-data |
Data format for DSM |
dsm.cor |
Check for autocorrelation in residuals |
dsm.var.gam |
Prediction variance estimation assuming independence |
dsm.var.movblk |
Variance estimation via parametric moving block bootstrap |
dsm.var.prop |
Prediction variance propagation for DSMs |
dsm_cor |
Check for autocorrelation in residuals |
dsm_varprop |
Variance propagation for density surface models |
dsm_var_gam |
Prediction variance estimation assuming independence |
dsm_var_movblk |
Variance estimation via parametric moving block bootstrap |
dsm_var_prop |
Prediction variance propagation for DSMs |
dummy_ddf |
Detection function objects when detection is certain |
generate.ds.uncertainty |
Generate data from a fitted detection function |
generate.mb.sample |
Moving block bootstrap sampler |
latlong2km |
Convert latitude and longitude to Northings and Eastings |
make.soapgrid |
Create a knot grid for the internal part of a soap film smoother. |
mexdolphins |
Pan-tropical spotted dolphins in the Gulf of Mexico |
obsdata |
Pan-tropical spotted dolphins in the Gulf of Mexico |
obs_exp |
Observed versus expected diagnostics for fitted DSMs |
plot.dsm |
Plot a density surface model. |
plot.dsm.var |
Create plots of abundance uncertainty |
plot_pred_by_term |
Spatially plot predictions per model term |
pred.polys |
Pan-tropical spotted dolphins in the Gulf of Mexico |
preddata |
Pan-tropical spotted dolphins in the Gulf of Mexico |
predict.dsm |
Predict from a fitted density surface model |
predict.fake_ddf |
Prediction for fake detection functions |
print.dsm |
Print a description of a density surface model object |
print.dsm.var |
Print a description of a density surface model variance object |
print.dsm_varprop |
Print a description of a density surface model variance object |
print.summary.dsm.var |
Print summary of density surface model variance object |
print.summary.dsm_varprop |
Print summary of density surface model variance object |
rqgam.check |
Randomised quantile residuals check plot for GAMs/DSMs |
rqgam_check |
Randomised quantile residuals check plot for GAMs/DSMs |
segdata |
Pan-tropical spotted dolphins in the Gulf of Mexico |
summary.dsm |
Summarize a fitted density surface model |
summary.dsm.var |
Summarize the variance of a density surface model |
summary.dsm_varprop |
Summarize the variance of a density surface model |
survey.area |
Pan-tropical spotted dolphins in the Gulf of Mexico |
trim.var |
Trimmed variance |
vis.concurvity |
Visualise concurvity between terms in a GAM |
vis_concurvity |
Visualise concurvity between terms in a GAM |