dsm.cor {dsm}

Check for autocorrelation in residuals

Description

This function is deprecated, use dsm_cor.

Usage

dsm.cor(
  dsm.obj,
  Transect.Label = "Transect.Label",
  Segment.Label = "Segment.Label",
  max.lag = 10,
  resid.type = "scaled.pearson",
  fun = cor,
  ylim = c(0, 1),
  subset = "all",
  ...
)

Arguments

dsm.obj

a fitted dsm object.

Transect.Label

label for the transect (default: Transect.Label). Using different labels can be useful when transects are split over geographical features or when transects are surveyed multiple times.

Segment.Label

label for the segments (default: Segment.Label).The result of calling order must make sense.

max.lag

maximum lag to calculate at.

resid.type

the type of residuals used, see residuals.gam. Defaults to "scaled.pearson" in the GAM case and "normalized" in the GAMM case (which are equivalent).

fun

the function to use, by default cor, must take two column vectors as arguments.

ylim

user defined limits in y direction.

subset

which subset of the data should the correlation function be calculated on?

...

other options to pass to plot.