Diagnostic Index Expectation Maximisation in R
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Documentation for package ‘diemr’ version 1.4
Help Pages
| brenthis | Dataset of butterfly genotypes |
| CheckDiemFormat | diem input file checker |
| diem | Diagnostic Index Expectation Maximisation |
| emPolarise | Polarises a marker |
| importPolarized | Imports genomic data polarized according to the specification |
| ModelOfDiagnostic | Model of Diagnostic Marker Based on All Individual State Counts |
| myotis | Dataset of modified genotypes of bats |
| pHetErrOnStateCount | Hybrid index, heterozygosity, error rate |
| plotDeFinetti | Plot the De Finetti Diagram for Polarized Genotypes |
| plotMarkerAxis | Add a Marker Axis with Chromosome Names to a Plot of Polarized Genotypes |
| plotPolarized | Plot Polarized Genotypes |
| sStateCount | Count states in a vector |
| testdata | Dataset of fish genotypes |
| vcf2diem | Convert vcf files to diem format |