asrs |
Similarity Matrices |
compactness |
Compactness Measure |
consensus_cluster |
Consensus clustering |
consensus_combine |
Combine algorithms |
consensus_evaluate |
Evaluate, trim, and reweigh algorithms |
consensus_matrix |
Consensus matrix |
CSPA |
Cluster-based Similarity Partitioning Algorithm (CSPA) |
cts |
Similarity Matrices |
dice |
Diverse Clustering Ensemble |
ev_confmat |
External validity indices |
ev_nmi |
External validity indices |
external_validity |
External validity indices |
graphs |
Graphical Displays |
graph_all |
Graphical Displays |
graph_cdf |
Graphical Displays |
graph_delta_area |
Graphical Displays |
graph_heatmap |
Graphical Displays |
graph_tracking |
Graphical Displays |
hgsc |
Gene expression data for High Grade Serous Carcinoma from TCGA |
impute_knn |
K-Nearest Neighbours imputation |
impute_missing |
Impute missing values |
k_modes |
K-modes |
LCA |
Latent Class Analysis |
LCE |
Linkage Clustering Ensemble |
majority_voting |
Majority voting |
min_fnorm |
Minimize Frobenius norm for between two matrices |
PAC |
Proportion of Ambiguous Clustering |
pcn |
Simulate and select null distributions on empirical gene-gene correlations |
pcn_select |
Simulate and select null distributions on empirical gene-gene correlations |
pcn_simulate |
Simulate and select null distributions on empirical gene-gene correlations |
prepare_data |
Prepare data for consensus clustering |
relabel_class |
Relabel classes to a standard |
sigclust |
Significant Testing of Clustering Results |
similarity |
Similarity Matrices |
srs |
Similarity Matrices |