cemfgs_rb |
CEMFGS_RB |
dbc_offline |
DBC (offline) |
des |
DES |
diaThor |
DiaThor: A package to calculate multiple diatom-based biotic indices |
diaThorAll |
Runs all the DiaThor functions in a pipeline |
diat_cemfgs_rb |
Calculate the combined classification of ecological guilds and size classes for diatoms |
diat_checkName |
Searches all the taxa database for the input name |
diat_des |
Calculates the Descy Index (DES) |
diat_disp |
Calculates the Diatom Index for Soda Pans (DISP) |
diat_diversity |
Calculate diversity parameters for diatoms using the vegan package |
diat_epid |
Calculates the EPID index (EPID) |
diat_getDiatBarcode |
Loads the 'Diat.Barcode' database into DiaThor in the correct format |
diat_guilds |
Calculate ecological guilds for diatoms |
diat_idap |
Calculates the Indice Diatomique Artois-Picardie (IDAP) |
diat_idch |
Calculates the Swiss Diatom Index (IDCH) |
diat_idp |
Calculates the Pampean Diatom Index (IDP) |
diat_ilm |
Calculates the ILM Index (ILM) |
diat_ips |
Calculates the Specific Polluosensitivity Index (IPS) index |
diat_loadData |
Loads the Data into DiaThor in the correct format |
diat_lobo |
Calculates the Lobo Index (LOBO) |
diat_morpho |
Calculate morphological parameters for diatoms |
diat_pbidw |
Calculates the PBIDW Index (PBIDW) |
diat_sampleData |
Sample Data |
diat_size |
Calculate size classes for diatoms |
diat_sla |
Calculates the Sladecek Index (SLA) |
diat_spear |
Calculates the SPEAR(herbicides) Index (SPEAR) |
diat_taxaList |
Creates a single list with taxa names from all indices within DiaThor |
diat_tdi |
Calculates the Trophic (TDI) index |
diat_vandam |
Calculates ecological information for diatoms based on the Van Dam classification |
disp |
DISP |
epid |
EPID |
idap |
IDAP |
idch |
ID-CH |
idp |
IDP |
ilm |
ILM |
ips |
IPS |
lobo |
LOBO |
pbidw |
PBIDW |
sla |
SLA |
spear |
SPEAR(h) |
taxaList |
taxaList |
tdi |
TDI |