Auto-GO: Reproducible, Robust and High Quality Ontology Enrichment Visualizations

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Documentation for package ‘autoGO’ version 0.9.1

Help Pages

barplotGO barplotGO
choose_database choose_database
comparisons Example comparison data.
counts Example raw count data.
deseq_analysis Differential Gene Expression Analysis
filtering_DE Filtering DESeq2 results
groups Example group data.
heatmapGO HeatmapGO
lolliGO lolliGO
read_enrich_tables Read enrichment results from tables
read_gene_lists Read all the genes lists
volcanoplot Volcano Plot