aniSNA |
aniSNA |
bootstrapped_difference_pvalues |
To obtain two non-overlapping bootstrapped versions and obtain p-values for the significance of difference between them |
correlation_analyze |
To perform correlation analysis for node-level network metrics |
distance_radian_coordinates |
Calculate distance between two pairs of radian coordinates |
elk_2010_permutations |
A list of 100 igraph objects obtained by permuting the raw elk_data_2010 and obtaining network from those |
elk_all_interactions_2010 |
Dataset of all possible interactions from elk_data_2010 |
elk_data_2010 |
Data to showcase functions in our package |
elk_interactions_2010 |
Dataset of interactions from elk_data_2010 using first mode as the spatial threshold |
elk_network_2010 |
An igraph object depicting the network obtained from elk_interactions_2010 |
get_coordinates_in_radian |
To convert latitude and longitude values from degrees to radians |
get_interactions |
To obtain interactions from raw GPS observations |
get_network_summary |
Calculates and prints network summary statistics |
get_spatial_threshold |
To obtain spatial threshold for calculating interactions from raw GPS observations. The threshold is obtained as the distance interval that captures maximum number of inter-individual interactions. |
global_CI |
To obtain confidence intervals around the observed global network statistics |
global_width_CI |
To obtain width of confidence intervals for global network metrics using bootstrapped versions at each level of sub-sampling |
interacting_pairs |
Function to obtain pairs of interacting animals |
network_from_interactions |
Function to obtain a network structure from interactions dataframe |
node_level_CI |
To obtain confidence intervals for node-level network metrics |
obtain_bootstrapped_samples |
To obtain bootstrapped versions of a network's adjacency matrix |
obtain_network_subsamples |
To obtain sub-networks of the observed network |
obtain_permuted_network_versions |
Function to obtain permuted networks from raw datastream |
plot.bootstrapped_pvalue_matrix |
To plot the results obtained from bootstrapped_difference_pvalues function |
plot.list_correlation_matrices |
To plot correlation analysis results |
plot.list_node_level_CI |
To plot the results for node-level confidence intervals |
plot.list_permuted_networks |
Function to plot the network metrics distribution of permuted networks |
plot.list_regression_matrices |
To plot regression analysis results |
plot.Subsampled_Network_Metrics |
To plot sub-sampling results |
plot.Subsampled_Permuted_Network_Metrics |
To plot sub-sampling results of the original network and permuted networks |
plot.Width_CI_matrix |
To plot the results obtained from width_CI function |
plot_network |
Visualize Animal Network |
regression_slope_analyze |
To perform regression analysis for local network metrics |
subsampled_network_metrics |
To generate subsamples and obtain network metrics of the subsamples |
subsampled_permuted_network_metrics |
To generate subsamples of the permuted networks and obtain network metrics of those subsamples |