D.make |
Generate D Matrix |
EM.MIM |
EM Algorithm for QTL MIM |
EM.MIM2 |
EM Algorithm for QTL MIM with Selective Genotyping |
EM.MIMv |
EM Algorithm for QTL MIM with Asymptotic Variance-Covariance Matrix |
EQF.permu |
EQF Permutation |
EQF.plot |
EQF plot |
IM.search |
QTL search by IM |
IM.search2 |
QTL search by IM with Selective Genotyping |
LOD.QTLdetect |
QTL Detect by LOD |
LRTthre |
LRT Threshold |
MIM.points |
QTL Short Distance Correction by MIM |
MIM.points2 |
QTL Short Distance Correction by MIM with Selective Genotyping |
MIM.search |
QTL search by MIM |
MIM.search2 |
QTL search by MIM with Seletive Genotyping |
progeny |
Progeny Simulation |
Q.make |
Generate Q Matrix |
Qhot |
QTL Hotspot |
Qhot.EQF |
EQF Matrix Conversion |