Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models


[Up] [Top]

Documentation for package ‘QGglmm’ version 0.7.4

Help Pages

QGglmm-package Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
QGglmm Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
QGicc Intra - Class Correlation coefficients (ICC) on the observed data scale
QGlink.funcs List of functions according to a distribution and a link function
QGmean Compute the phenotypic mean on the observed scale
QGmvicc Intra - Class Correlation coefficients (ICC) on the observed data scale (multivariate analysis).
QGmvmean Compute the multivariate phenotypic mean on the observed scale
QGmvparams Quantitative Genetics parameters from GLMM estimates (multivariate analysis).
QGmvpred Predict the evolutionary response to selection on the observed scale
QGmvpsi Compute a multivariate "Psi" (used to compute the additive genetic variance on the observed scale).
QGparams Quantitative Genetics parameters from GLMM estimates.
QGpred Predict the evolutionary response to selection on the observed scale
QGpsi Compute "Psi" (used to compute the additive genetic variance on the observed scale).
QGvar.dist Compute the distribution variance
QGvar.exp Compute the variance of expected values (i.e. the latent values after inverse-link transformation.)
QGvcov Compute the phenotypic variance-covariance matrix on the observed / expected scale