Protocol Inspection and State Machine Analysis

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Documentation for package ‘PRISMA’ version 0.2-7

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

PRISMA-package	Protocol Inspection and State Machine Analysis
asap	The ASAP Data Set
corpusToPrisma	Convert tm copus to PRISMA
estimateDimension	Estimate Inner Dimension
getDuplicateData	Restores Data with Duplicates
getMatrixFactorizationLabels	Convert Coordinates of Matrix Factorization to Labels
loadPrismaData	Load PRISMA Data Files
plot.prisma	Generics For PRISMA Objects
plot.prismaDimension	Generics For PRISMA Objects
plot.prismaMF	Generics For PRISMA Objects
print.prisma	Generics For PRISMA Objects
print.prismaDimension	Generics For PRISMA Objects
PRISMA	Protocol Inspection and State Machine Analysis
prismaDuplicatePCA	Matrix Factorization Based on Replicate-Aware PCA
prismaHclust	Matrix Factorization Based on Hierarchical Clustering
prismaNMF	Matrix Factorization Based on Replicate-Aware NMF
thesis	The Thesis Data Set