CVLasoelacox |
Cross Validations for Lasso Elastic Net Survival predictive models and Classification |
cvle |
Constructor for the cvle class |
cvle-class |
The cvle Class. |
CVMajorityvotes |
Cross validation for majority votes |
CVMetSpecificCoxPh |
Cross validation for the Metabolite specific analysis |
cvmm |
Constructor for the cvmm class |
cvmm-class |
The cvmm Class. |
cvmv |
Constructor for the cvmv class |
cvmv-class |
The cvmv Class. |
CVPcaPls |
Cross Validations for PCA and PLS based methods |
cvpp |
Constructor for the cvpp class |
cvpp-class |
The cvpp Class. |
cvsim |
Constructor for the cvsim class |
cvsim-class |
The cvsim Class. |
CVSimet |
Cross validation for sequentially increases metabolites |
DataHR |
Survival and Prognostic Data . |
DistHR |
Null Distribution of the Estimated HR |
EstimateHR |
Classification, Survival Estimation and Visualization |
fcv |
Constructor for the fcv class |
fcv-class |
The fcv Class. |
Icvlasoel |
Inner and Outer Cross Validations for Lasso Elastic Net Survival predictive models and Classification |
Lasoelacox |
Wapper function for glmnet |
Majorityvotes |
Classifiction for Majority Votes |
MetabolicSurv |
MetabolicSurv: A biomarker validation approach for predicting survival using metabolic signature. |
MetFreq |
Frequency of Selected Metabolites from the LASSO, Elastic-net Cross-Validation |
ms |
The ms class |
MSData |
Generate Artificial Metabolic Survival Data |
MSpecificCoxPh |
Metabolite by metabolite Cox proportional analysis |
perm |
Constructor for the perm class |
perm-class |
The perm Class. |
plot-method |
Plot method for cvle class |
plot-method |
Plot method for cvmm class |
plot-method |
Plot method for cvmv class |
plot-method |
Plot method for cvpp class |
plot-method |
Plot method for cvsim class |
plot-method |
Plot method for fcv class |
plot-method |
Plot method for ms class |
plot-method |
Plot method for perm class |
show-method |
Show method for cvle class |
show-method |
Show method for cvmm class |
show-method |
Show method for cvmv class |
show-method |
Show method for cvpp class |
show-method |
Show method for cvsim class |
show-method |
Show method for fcv class |
show-method |
Show method for ms class |
show-method |
Show method for perm class |
SIMet |
Sequential Increase in Metabolites for the PCA or PLS classifier |
summary-method |
Summary method for cvle class |
summary-method |
Summary method for cvmm class |
summary-method |
Summary method for cvmv class |
summary-method |
Summary method for cvpp class |
summary-method |
Summary method for cvsim class |
summary-method |
Summary method for fcv class |
summary-method |
Summary method for ms class |
summary-method |
Summary method for perm class |
SurvPcaClass |
Survival PCA and Classification for metabolic data |
SurvPlsClass |
Survival PLS and Classification for metabolic data |